Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Elongation factor 1-alpha [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene76803 SustainPine v3.0 397
AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Saccharomycetales RepID=A9QAA2_9ASCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 9.992e-33
Internal
sp_v3.0_unigene79033 SustainPine v3.0 366
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 2.0e-26
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 3.186e-26
Internal
sp_v3.0_unigene79239 SustainPine v3.0 284
AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-26
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 5.299e-36
Misassembled
sp_v3.0_unigene80177 SustainPine v3.0 194
AutoFact: translation elongation factor-1 alpha [Picea abies] 3.0e-12
FL-Next: sp=Elongation factor 1-alpha; Euglena gracilis. 0.0
Sma3: Elongation factor 1-alpha 1.313e-33
Internal
sp_v3.0_unigene81451 SustainPine v3.0 186
AutoFact: Elongation factor-1 alpha (Fragment) n=11 Tax=Triaenonychidae RepID=D7RGG5_9ARAC 5.0e-27
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene102674 SustainPine v3.0 377
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.42e-29
Internal
sp_v3.0_unigene121393 SustainPine v3.0 166
AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 3.0e-17
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.636e-34
Internal
sp_v3.0_unigene143206 SustainPine v3.0 534
AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 7.0e-29
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.643e-31
Internal
sp_v3.0_unigene145974 SustainPine v3.0 1351
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Misassembled
sp_v3.0_unigene154786 SustainPine v3.0 359
AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 2.509e-29
Internal
sp_v3.0_unigene155743 SustainPine v3.0 406
AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Dimargaris RepID=Q76II4_9FUNG 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.56e-20
Internal
sp_v3.0_unigene156575 SustainPine v3.0 463
AutoFact: Elongation factor 1-alpha (Fragment) n=19 Tax=Myxogastria RepID=D0PPE2_9MYCE 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 1.853e-37
Internal
sp_v3.0_unigene156600 SustainPine v3.0 273
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Colpoda inflata RepID=O96974_9CILI 2.94273e-44
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene158946 SustainPine v3.0 341
AutoFact: Elongation factor 1 alpha (Fragment) n=183 Tax=Endopterygota RepID=Q5MM87_AEDAE 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 4.575e-19
Internal
sp_v3.0_unigene188397 SustainPine v3.0 378
AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Acramoeba dendroida RepID=D0PPF3_9EUKA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene188490 SustainPine v3.0 491
AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=stramenopiles RepID=Q2TTF1_9STRA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 8.709e-16
Internal
sp_v3.0_unigene208499 SustainPine v3.0 281
AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 6.0e-28
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 7.357e-39
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain