Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Topless-related protein 4 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene654 SustainPine v3.0 1453
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.547e-09
Putative C-terminus
sp_v3.0_unigene2753 SustainPine v3.0 5002
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 1.451e-11
Complete
sp_v3.0_unigene40423 SustainPine v3.0 663
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.611e-09
Putative C-terminus
sp_v3.0_unigene40426 SustainPine v3.0 696
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 2.0e-23
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.642e-07
Internal
sp_v3.0_unigene40429 SustainPine v3.0 197
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene45577 SustainPine v3.0 346
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.302e-09
Internal
sp_v3.0_unigene46306 SustainPine v3.0 319
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 9.401e-10
Internal
sp_v3.0_unigene53270 SustainPine v3.0 258
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 7.302e-12
Putative N-terminus
sp_v3.0_unigene67632 SustainPine v3.0 295
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 2.0e-25
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.057e-09
Internal
sp_v3.0_unigene69428 SustainPine v3.0 179
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73040 SustainPine v3.0 296
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 1.0e-24
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 4.805e-07
Internal
sp_v3.0_unigene76464 SustainPine v3.0 290
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 4.0e-16
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.816e-09
Internal
sp_v3.0_unigene116350 SustainPine v3.0 254
AutoFact: Topless-related protein 4 n=4 Tax=Arabidopsis RepID=TPR4_ARATH 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130279 SustainPine v3.0 456
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 8.0e-16
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene130947 SustainPine v3.0 383
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131400 SustainPine v3.0 349
AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-07
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.075e-09
Internal
sp_v3.0_unigene139156 SustainPine v3.0 198
AutoFact: WD-repeat protein, putative 2.0e-17
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 4.924e-12
Internal
sp_v3.0_unigene142974 SustainPine v3.0 439
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene145482 SustainPine v3.0 418
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene146237 SustainPine v3.0 1000
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 2.0e-10
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain