Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: translational initiation factor 4A-1 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55117 SustainPine v3.0 335
AutoFact: ATP-dependent RNA helicase DBP5 n=7 Tax=Arthrodermataceae RepID=C5FBW6_ARTOC 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A 4.471e-08
Putative C-terminus
sp_v3.0_unigene73635 SustainPine v3.0 522
AutoFact: Eukaryotic initiation factor 4A n=16 Tax=Schizophora RepID=IF4A_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 34 8.394e-08
Internal
sp_v3.0_unigene157797 SustainPine v3.0 465
AutoFact: RNA helicase involved in maturation of 18S rRNA [Scheffersomyces stipitis CBS 6054] sp|A3GFV3.1|FAL1_PICST RecName: Full=ATP-dependent RNA helicase FAL1 gb|EAZ63408.1| RNA helicase involved in maturation of 18S rRNA [Pichia stipitis CBS 6054] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.406e-09
C-terminus
sp_v3.0_unigene158989 SustainPine v3.0 393
AutoFact: Eukaryotic initiation factor 4A n=3 Tax=Ditrysia RepID=B0FYV2_PLUXY 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic initiation factor 4A-like protein 9.322e-08
Internal
sp_v3.0_unigene159030 SustainPine v3.0 524
AutoFact: RecName: Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2; AltName: Full=ATP-dependent RNA helicase eIF4A-2 emb|CAA43513.1| nicotiana eukaryotic translation initiation factor 4A [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.389e-09
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain