Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68440 SustainPine v3.0 238
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9SDI7_RICCO 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene72228 SustainPine v3.0 185
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9SDI7_RICCO 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74918 SustainPine v3.0 204
• AutoFact: U-box domain containing protein 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative immediate-early fungal elicitor protein 3.64e-08
N-terminus
sp_v3.0_unigene95570 SustainPine v3.0 456
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9SDI7_RICCO 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene108393 SustainPine v3.0 251
• AutoFact: E3 ubiquitin-protein ligase PUB22 n=3 Tax=Brassicaceae RepID=PUB22_ARATH 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene115415 SustainPine v3.0 307
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RJ04_RICCO 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161299 SustainPine v3.0 214
• AutoFact: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana] sp|Q9SVC6.1|PUB22_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB22; AltName: Full=Plant U-box protein 22; AltName: Full=U-box domain-containing protein 22 emb|CAB43434.1| putative protein [Arab 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr8 scaffold_99, whole genome shotgun sequence 1.105e-08
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain