Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Valyl-tRNA synthetase [Arabidopsis thaliana]

Source: Ref_annotation from RefSeq

Species: Arabidopsis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5367 SustainPine v3.0 3463
AutoFact: Valyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SWL0_RICCO 0.0
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase 1.747e-15
C-terminus
sp_v3.0_unigene24996 SustainPine v3.0 1197
AutoFact: Valyl-tRNA synthetase, putative [Oryza sativa Japonica Group] gb|AAX95729.1| valyl-tRNA synthetase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase 1.447e-11
Putative C-terminus
sp_v3.0_unigene37298 SustainPine v3.0 495
AutoFact: similar to valyl tRNA synthetase [Arabidopsis thaliana] gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] 0.0
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase, putative 9.958e-15
Internal
sp_v3.0_unigene51820 SustainPine v3.0 242
AutoFact: similar to valyl tRNA synthetase [Arabidopsis thaliana] gb|AAR23705.1| At1g14610 [Arabidopsis thaliana] 3.0e-16
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase 4.191e-08
Internal
sp_v3.0_unigene75049 SustainPine v3.0 411
AutoFact: Valyl-tRNA synthetase n=2 Tax=Acidovorax RepID=A1W9W2_ACISJ 0.0
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase 4.956e-08
Internal
sp_v3.0_unigene77322 SustainPine v3.0 175
AutoFact: Valyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SWL0_RICCO 4.0e-10
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase, putative 7.092e-12
Internal
sp_v3.0_unigene78289 SustainPine v3.0 247
AutoFact: valine-tRNA ligase [Coprinopsis cinerea okayama7#130] gb|EAU84605.1| valine-tRNA ligase [Coprinopsis cinerea okayama7#130] 7.0e-28
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene159417 SustainPine v3.0 157
AutoFact: PREDICTED: valyl-tRNA synthetase-like n=1 Tax=Anolis carolinensis RepID=UPI000203B29B 6.0e-09
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain