Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Pseudouridine synthase family protein chr1:29665269-29667557 FORWARD LENGTH=478

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10945 SustainPine v3.0 344
AutoFact: RNA pseudourine synthase 3, mitochondrial n=3 Tax=Arabidopsis RepID=PUS3_ARATH 1.0e-19
FL-Next: Isoform 2 of RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 0.0
C-terminus
sp_v3.0_unigene14483 SustainPine v3.0 454
AutoFact: putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] dbj|BAD10435.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] 7.0e-31
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: RNA-uridine isomerase 3 1.656e-09
Putative C-terminus
sp_v3.0_unigene40123 SustainPine v3.0 142
AutoFact: RNA pseudourine synthase 3, mitochondrial n=3 Tax=Arabidopsis RepID=PUS3_ARATH 1.0e-09
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene41275 SustainPine v3.0 500
AutoFact: RNA pseudourine synthase 3, mitochondrial n=3 Tax=Arabidopsis RepID=PUS3_ARATH 1.0e-21
FL-Next: Isoform 2 of RNA pseudourine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 0.0
Sma3: RNA-uridine isomerase 3 4.494e-10
C-terminus
sp_v3.0_unigene58583 SustainPine v3.0 249
AutoFact: putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] dbj|BAD10435.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] 8.0e-25
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: RNA-uridine isomerase 3 1.777e-09
Internal
sp_v3.0_unigene78583 SustainPine v3.0 257
AutoFact: putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] dbj|BAD10435.1| putative ribosomal large subunit pseudouridine synthase C protein [Oryza sativa Japonica Group] 5.0e-13
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene120927 SustainPine v3.0 352
AutoFact: Ribosomal pseudouridine synthase, putative n=1 Tax=Ricinus communis RepID=B9SLG9_RICCO 1.0e-30
FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: RNA-uridine isomerase 3 5.586e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain