Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 60S acidic ribosomal protein family chr3:16163983-16164658 FORWARD LENGTH=111

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18919 SustainPine v3.0 1400
• AutoFact: 60s acidic ribosomal protein [Prunus dulcis] gb|ABH03379.1| 60S acidic ribosomal protein [Prunus dulcis] 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene27435 SustainPine v3.0 491
• AutoFact: Acidic ribosomal protein P2 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0R4_CHLRE 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acidic ribosomal protein P2 0.0
Complete
sp_v3.0_unigene35516 SustainPine v3.0 800
• AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36691 SustainPine v3.0 791
• AutoFact: 60s acidic ribosomal protein [Prunus dulcis] gb|ABH03379.1| 60S acidic ribosomal protein [Prunus dulcis] 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene150416 SustainPine v3.0 279
• AutoFact: Acidic ribosomal protein P2 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J0R4_CHLRE 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acidic ribosomal protein 1.103e-08
Putative Complete
sp_v3.0_unigene152852 SustainPine v3.0 320
• AutoFact: 60S acidic ribosomal protein P2 n=22 Tax=Eutheria RepID=RLA2_HUMAN 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P2 2.253e-11
Putative Complete
sp_v3.0_unigene154593 SustainPine v3.0 483
• AutoFact: PREDICTED: ribosomal protein P2-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBE8E 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acidic ribosomal protein P2 8.619e-09
Complete
sp_v3.0_unigene157514 SustainPine v3.0 251
• AutoFact: Ribosomal protein, large P2 n=1 Tax=Danio rerio RepID=Q6PBJ9_DANRE 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain