Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: QRT3 Pectin lyase-like superfamily protein chr4:10849911-10852090 REVERSE LENGTH=481

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12837 SustainPine v3.0 1871
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 0.0
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene18216 SustainPine v3.0 2230
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 0.0
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene20123 SustainPine v3.0 420
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 3.0e-31
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene51298 SustainPine v3.0 154
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 6.0e-09
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene52645 SustainPine v3.0 218
• AutoFact: Unassigned protein
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63164 SustainPine v3.0 331
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 1.0e-11
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64212 SustainPine v3.0 209
• AutoFact: Quartet 3 (Fragment) n=1 Tax=Picea abies RepID=B2KZH0_PICAB 8.0e-14
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72260 SustainPine v3.0 264
• AutoFact: Unassigned protein
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene109420 SustainPine v3.0 510
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-35
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene116904 SustainPine v3.0 521
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-17
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125335 SustainPine v3.0 635
• AutoFact: Polygalacturonase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCM0_CUCME 0.0
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene137311 SustainPine v3.0 515
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 6.0e-28
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene159458 SustainPine v3.0 479
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 9.0e-32
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene160804 SustainPine v3.0 337
• AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 5.0e-08
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: cDNA clone:001-204-C08, full insert sequence 8.285e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain