Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HMGB2, HMG BETA 1, NFD2, NFD02 high mobility group B2 chr1:7177282-7178487 FORWARD LENGTH=144

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4702 SustainPine v3.0 487
AutoFact: HMG-protein [Plantago major] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HMG1/2-like protein 5.394e-21
Putative Complete
sp_v3.0_unigene17386 SustainPine v3.0 1219
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20328 SustainPine v3.0 680
AutoFact: High mobility group protein B3 n=2 Tax=Physcomitrella patens RepID=A9Q9L0_9BRYO 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene20712 SustainPine v3.0 1149
AutoFact: High mobility group protein B3 n=2 Tax=Physcomitrella patens RepID=A9Q9L0_9BRYO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene65456 SustainPine v3.0 285
AutoFact: pfam00505, HMG_box, HMG (high mobility group) box 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HMG1/2-like protein 4.082e-21
Internal
sp_v3.0_unigene208485 SustainPine v3.0 449
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HMG1/2-like protein 1.256e-21
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain