Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: GGPS1 geranylgeranyl pyrophosphate synthase 1 chr4:17343513-17344628 FORWARD LENGTH=371

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2333 SustainPine v3.0 1642
• AutoFact: Geranylgeranyl diphosphate synthase n=3 Tax=Pinaceae RepID=Q8W1R9_ABIGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9642 SustainPine v3.0 1202
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene9737 SustainPine v3.0 1320
• AutoFact: Geranyl diphosphate synthase 2 n=1 Tax=Picea abies RepID=B1A9K6_PICAB 0.0
• FL-Next: tr=Geranyl diphosphate synthase 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Geranyl diphosphate synthase 2 0.0
Putative Complete
sp_v3.0_unigene16956 SustainPine v3.0 1496
• AutoFact: Geranylgeranyl diphosphate synthase 6 n=1 Tax=Picea abies RepID=B1A9L0_PICAB 0.0
• FL-Next: tr=Geranylgeranyl diphosphate synthase 6; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Geranylgeranyl diphosphate synthase 6 0.0
Complete
sp_v3.0_unigene17073 SustainPine v3.0 1617
• AutoFact: Isoprenyl diphosphate synthase n=2 Tax=Picea RepID=D2IT07_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18396 SustainPine v3.0 637
• AutoFact: Geranylgeranyl diphosphate synthase n=3 Tax=Pinaceae RepID=Q8W1R9_ABIGR 0.0
• FL-Next: tr=Geranylgeranyl diphosphate synthase; Abies grandis (Grand fir). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
N-terminus
sp_v3.0_unigene37442 SustainPine v3.0 909
• AutoFact: Geranylgeranyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=Q64KQ5_GINBI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Complete
sp_v3.0_unigene51826 SustainPine v3.0 494
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene93973 SustainPine v3.0 1473
• AutoFact: Geranylgeranyl diphosphate synthase n=3 Tax=Pinaceae RepID=Q8W1R9_ABIGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene128979 SustainPine v3.0 626
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ3_ABIGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
N-terminus
sp_v3.0_unigene132226 SustainPine v3.0 569
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene209693 SustainPine v3.0 829
• AutoFact: Isoprenyl diphosphate synthase n=2 Tax=Picea RepID=D2IT07_PICAB 0.0
• FL-Next: tr=Isoprenyl diphosphate synthase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain