Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATARCA, RACK1A_AT, RACK1A Transducin/WD40 repeat-like superfamily protein chr1:6222325-6223901 FORWARD LENGTH=327

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene265 SustainPine v3.0 1770
• AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=4 Tax=rosids RepID=GBLP_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25858 SustainPine v3.0 487
• AutoFact: guanine nucleotide binding protein beta polypeptide 2-like 1 [Lethenteron japonicum] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 1.034e-18
C-terminus
sp_v3.0_unigene32160 SustainPine v3.0 471
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
C-terminus
sp_v3.0_unigene61761 SustainPine v3.0 271
• AutoFact: receptor for activated protein kinase c (rack1) [Aedes aegypti] ref|XP_001863303.1| activated protein kinase C receptor [Culex quinquefasciatus] gb|ABF18075.1| activated protein kinase C receptor [Aedes aegypti] gb|EAT34720.1| receptor for activated prote 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.996e-18
Internal
sp_v3.0_unigene141210 SustainPine v3.0 271
• AutoFact: Guanine nucleotide-binding protein beta subunit-like protein n=4 Tax=Andropogoneae RepID=B4FKM1_MAIZE 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.555e-18
Internal
sp_v3.0_unigene153607 SustainPine v3.0 532
• AutoFact: Receptor of activated protein kinase C 1A, component of 40S small ribosomal subunit [Ostreococcus lucimarinus CCE9901] ref|XP_001422858.1| Receptor of activated protein kinase C 1B, component of 40S small ribosomal subunit [Ostreococcus lucimarinus CCE990 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
Internal
sp_v3.0_unigene155927 SustainPine v3.0 474
• AutoFact: Activated protein kinase C receptor RACK1-rat, putative n=3 Tax=Chromadorea RepID=A8Q1C2_BRUMA 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.673e-19
C-terminus
sp_v3.0_unigene156616 SustainPine v3.0 450
• AutoFact: Guanine nucleotide binding protein beta subunit-like protein n=1 Tax=Thalassiosira pseudonana RepID=B8BQ72_THAPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.156e-18
Internal
sp_v3.0_unigene156925 SustainPine v3.0 313
• AutoFact: Guanine nucleotide-binding protein subunit beta-2-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC99_PHYIT 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene159001 SustainPine v3.0 171
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 3.182e-15
Internal
sp_v3.0_unigene167489 SustainPine v3.0 227
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-2-like 1-like n=5 Tax=Amniota RepID=UPI0001D62689 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene188976 SustainPine v3.0 421
• AutoFact: GTP-binding regulatory protein beta chain homolog-Ch (ISS) n=2 Tax=Ostreococcus RepID=Q00X27_OSTTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta-like protein 2.945e-18
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain