Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L6 family protein chr1:27850033-27851299 REVERSE LENGTH=233

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3311 SustainPine v3.0 1241
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene21899 SustainPine v3.0 717
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Monosiga brevicollis RepID=A9UQ35_MONBE 6.0e-35
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: 60S ribosomal protein L6 1.102e-39
Complete
sp_v3.0_unigene23619 SustainPine v3.0 826
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene25587 SustainPine v3.0 865
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 1.0e-35
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Putative Complete
sp_v3.0_unigene26180 SustainPine v3.0 354
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SVY4_PHYPA 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene26489 SustainPine v3.0 421
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBR7_THAPS 6.0e-38
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene27652 SustainPine v3.0 616
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 1.96182e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene28528 SustainPine v3.0 283
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Postia placenta Mad-698-R RepID=B8P336_POSPM 5.0e-22
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene35839 SustainPine v3.0 620
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 9.99967e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene55855 SustainPine v3.0 332
• AutoFact: Ribosomal protein rpl6 n=1 Tax=Eurythoe complanata RepID=A8UFZ6_EURCO 9.94922e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene78269 SustainPine v3.0 171
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Chlorella variabilis RepID=E1ZAC3_9CHLO 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene118752 SustainPine v3.0 262
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CYH9_LACBS 6.0e-26
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene140613 SustainPine v3.0 428
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 1.00053e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene156072 SustainPine v3.0 318
• AutoFact: 60S ribosomal protein L6 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WZ30_9STRA 2.0e-28
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene156152 SustainPine v3.0 410
• AutoFact: 60s ribosomal protein l6 (Fragment) n=1 Tax=Pfiesteria piscicida RepID=E8Z656_PFIPI 4.0e-35
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene156282 SustainPine v3.0 420
• AutoFact: 60s ribosomal protein l6 (Fragment) n=1 Tax=Pfiesteria piscicida RepID=E8Z656_PFIPI 3.0e-31
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene157495 SustainPine v3.0 256
• AutoFact: 60S ribosomal protein L6-1 n=8 Tax=Brassicaceae RepID=RL61_ARATH 4.0e-11
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157986 SustainPine v3.0 180
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Cyanophora paradoxa RepID=Q9SMI5_CYAPA 1.0e-09
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166452 SustainPine v3.0 413
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Postia placenta Mad-698-R RepID=B8P336_POSPM 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 2.721e-38
N-terminus
sp_v3.0_unigene183244 SustainPine v3.0 431
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BYQ8_9EUKA 4.0e-24
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain