Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DEA(D/H)-box RNA helicase family protein chr1:20574634-20577141 FORWARD LENGTH=501

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene478 SustainPine v3.0 2596
AutoFact: DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana] sp|Q9C718.1|RH20_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 20 gb|AAG50841.1|AC073944_8 ethylene-responsive RNA helicase, putative [Arabidopsis thaliana] gb|AAL32823.1| Unknown pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene4278 SustainPine v3.0 616
AutoFact: Helicase, C-terminal [Medicago truncatula] 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 6.509e-08
Putative C-terminus
sp_v3.0_unigene8620 SustainPine v3.0 2421
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9791 SustainPine v3.0 1034
AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 3.81e-08
Putative C-terminus
sp_v3.0_unigene53781 SustainPine v3.0 455
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 2.918e-08
Putative C-terminus
sp_v3.0_unigene76831 SustainPine v3.0 301
AutoFact: RNA helicase (Dbp), putative n=2 Tax=Trichocomaceae RepID=B6QP35_PENMQ 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 2.563e-08
Internal
sp_v3.0_unigene78576 SustainPine v3.0 279
AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 2.004e-08
Internal
sp_v3.0_unigene99035 SustainPine v3.0 1241
AutoFact: Helicase, C-terminal [Medicago truncatula] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.867e-08
C-terminus
sp_v3.0_unigene118361 SustainPine v3.0 332
AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 3.715e-08
Putative C-terminus
sp_v3.0_unigene127176 SustainPine v3.0 570
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 6.609e-08
Putative C-terminus
sp_v3.0_unigene127273 SustainPine v3.0 655
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.829e-08
C-terminus
sp_v3.0_unigene131931 SustainPine v3.0 449
AutoFact: ethylene-responsive RNA helicase [Solanum lycopersicum] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 20 4.622e-09
Internal
sp_v3.0_unigene161165 SustainPine v3.0 211
AutoFact: RNA helicase, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LBR0_9ALVE 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.821e-08
Internal
sp_v3.0_unigene162623 SustainPine v3.0 411
AutoFact: DEAD-box ATP-dependent RNA helicase 20 n=3 Tax=Poaceae RepID=RH20_ORYSJ 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 1.687e-08
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain