Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ARP1, emb2207, RPL3A, RP1 ribosomal protein 1 chr1:16266992-16268631 FORWARD LENGTH=389

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene475 SustainPine v3.0 1843
• AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11424 SustainPine v3.0 1785
• AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17236 SustainPine v3.0 1797
• AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene31949 SustainPine v3.0 354
• AutoFact: PREDICTED: 60S ribosomal protein L3 [Apis mellifera] 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 6.539e-14
C-terminus
sp_v3.0_unigene64679 SustainPine v3.0 235
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 6.541e-18
Internal
sp_v3.0_unigene75245 SustainPine v3.0 347
• AutoFact: 60S ribosomal protein L3 n=2 Tax=Agaricomycetes RepID=B8PIG2_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.138e-21
Internal
sp_v3.0_unigene125103 SustainPine v3.0 327
• AutoFact: 60S ribosomal protein L3 n=7 Tax=Endopterygota RepID=F4WA35_9HYME 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.797e-11
Internal
sp_v3.0_unigene127088 SustainPine v3.0 1013
• AutoFact: 60S ribosomal protein L3-1 [Arabidopsis thaliana] ref|NP_973966.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] ref|NP_001031146.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] ref|NP_001185148.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 8.169e-18
N-terminus
sp_v3.0_unigene133126 SustainPine v3.0 218
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 3.449e-14
Internal
sp_v3.0_unigene142265 SustainPine v3.0 985
• AutoFact: Ribosomal protein L3, component of cytosolic 80S ribosome and 60S large subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RQG7_OSTLU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.075e-17
N-terminus
sp_v3.0_unigene144491 SustainPine v3.0 845
• AutoFact: ribosomal protein L3 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.788e-17
N-terminus
sp_v3.0_unigene145014 SustainPine v3.0 328
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.368e-17
Internal
sp_v3.0_unigene146088 SustainPine v3.0 622
• AutoFact: 60S ribosomal protein L3-1 n=7 Tax=Brassicaceae RepID=RL31_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.978e-21
Putative N-terminus
sp_v3.0_unigene146194 SustainPine v3.0 737
• AutoFact: L3 Ribosomal protein n=1 Tax=Medicago sativa subsp. x varia RepID=Q9SBR8_MEDSV 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 4.258e-17
Internal
sp_v3.0_unigene150096 SustainPine v3.0 274
• AutoFact: 60S ribosomal protein L3 n=1 Tax=Trichinella spiralis RepID=E5SJS8_TRISP 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.239e-17
Putative C-terminus
sp_v3.0_unigene150272 SustainPine v3.0 325
• AutoFact: Ribosomal protein L3 n=1 Tax=Ectocarpus siliculosus RepID=D7FHR5_ECTSI 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.479e-17
Putative C-terminus
sp_v3.0_unigene151819 SustainPine v3.0 480
• AutoFact: Ribosomal protein L3 n=3 Tax=Polyphaga RepID=D1M828_9CUCU 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.239e-17
C-terminus
sp_v3.0_unigene153715 SustainPine v3.0 283
• AutoFact: Ribosomal protein L3B n=1 Tax=Nicotiana tabacum RepID=Q6TKQ9_TOBAC 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.053e-17
C-terminus
sp_v3.0_unigene155386 SustainPine v3.0 369
• AutoFact: Ribosomal protein L3 n=1 Tax=Penaeus monodon RepID=C4PL18_PENMO 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.138e-21
Internal
sp_v3.0_unigene155948 SustainPine v3.0 461
• AutoFact: 60S ribosomal protein L3 n=4 Tax=Chromadorea RepID=RL3_TOXCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.479e-17
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain