Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Ribosomal protein S8 family protein chr5:24112499-24113084 REVERSE LENGTH=130

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11 SustainPine v3.0 1405
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4931 SustainPine v3.0 734
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12732 SustainPine v3.0 907
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene15258 SustainPine v3.0 514
AutoFact: Ribosomal protein 22 of the small subunit n=4 Tax=Agaricomycotina RepID=Q9UUP9_PHARH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 3.763e-08
Complete
sp_v3.0_unigene17496 SustainPine v3.0 1006
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23894 SustainPine v3.0 518
AutoFact: putative ribosomal protein S15A [Diaphorina citri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 5.959e-08
Complete
sp_v3.0_unigene24288 SustainPine v3.0 459
AutoFact: 40S ribosomal protein S15a [Salmo salar] gb|AAP20217.1| 40S ribosomal protein S15A [Pagrus major] emb|CAG03318.1| unnamed protein product [Tetraodon nigroviridis] gb|ACH70997.1| ribosomal protein S15-1 [Salmo salar] gb|ACI66432.1| 40S ribosomal protein S1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 6.434e-08
Putative Complete
sp_v3.0_unigene26500 SustainPine v3.0 469
AutoFact: 40S ribosomal protein S15a, putative n=2 Tax=Theileria RepID=Q4N673_THEPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 4.489e-08
Complete
sp_v3.0_unigene31086 SustainPine v3.0 526
AutoFact: 40S ribosomal protein S15a (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDL6_BRAPC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 3.856e-08
Complete
sp_v3.0_unigene32310 SustainPine v3.0 800
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33120 SustainPine v3.0 831
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene33180 SustainPine v3.0 509
AutoFact: Putative ribosomal protein S15a n=1 Tax=Barentsia elongata RepID=A8UAE7_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 5.959e-08
Complete
sp_v3.0_unigene54254 SustainPine v3.0 380
AutoFact: 40S ribosomal protein S15a-4 [Arabidopsis thaliana] sp|Q9LX88.3|R15A4_ARATH RecName: Full=40S ribosomal protein S15a-4 emb|CAB90931.1| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] gb|AAK76511.1| putative cytoplasmic ribosomal protein S15 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene118690 SustainPine v3.0 304
AutoFact: Ribosomal protein S15a n=3 Tax=Chlamydomonadales RepID=A8JE07_CHLRE 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 2.733e-08
N-terminus
sp_v3.0_unigene145176 SustainPine v3.0 242
AutoFact: 40S ribosomal protein S15a n=1 Tax=Phytophthora infestans T30-4 RepID=D0NUU4_PHYIT 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene145345 SustainPine v3.0 432
AutoFact: 40S ribosomal protein S15a-1 [Arabidopsis thaliana] ref|NP_200793.1| 40S ribosomal protein S15a-1 [Arabidopsis thaliana] ref|NP_973783.1| 40S ribosomal protein S15a-1 [Arabidopsis thaliana] ref|XP_002866354.1| RPS15A [Arabidopsis lyrata subsp. lyrata] ref 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 2.173e-08
N-terminus
sp_v3.0_unigene150322 SustainPine v3.0 458
AutoFact: ribosomal protein S15a [Artemia franciscana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 2.733e-08
Complete
sp_v3.0_unigene151000 SustainPine v3.0 288
AutoFact: 40S ribosomal protein S15a [Theileria parva strain Muguga] ref|XP_952642.1| 40s ribosomal protein s15a [Theileria annulata strain Ankara] emb|CAI74910.1| 40s ribosomal protein s15a, putative [Theileria annulata] gb|EAN32350.1| 40S ribosomal protein S15a, 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 4.24e-08
C-terminus
sp_v3.0_unigene151369 SustainPine v3.0 132
AutoFact: Ribosomal protein s15a n=3 Tax=Bdelloidea RepID=B2ZF77_ADIVA 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152262 SustainPine v3.0 363
AutoFact: Ribosomal protein s15a n=3 Tax=Bdelloidea RepID=B2ZF77_ADIVA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 30S ribosomal protein S8, putative 6.135e-08
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain