Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Polyprotein

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene100063 SustainPine v3.0 794
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein 1.265e-19
Complete
sp_v3.0_unigene122463 SustainPine v3.0 261
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-21
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Sma3: Polyprotein 2.038e-06
Internal
sp_v3.0_unigene123622 SustainPine v3.0 156
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Polyprotein 5.082e-06
Internal
sp_v3.0_unigene133829 SustainPine v3.0 487
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.842e-15
N-terminus
sp_v3.0_unigene135248 SustainPine v3.0 247
AutoFact: RVT_1 domain containing protein 6.0e-06
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Polyprotein 4.823e-06
Internal
sp_v3.0_unigene142155 SustainPine v3.0 327
AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein 1.067e-06
Internal
sp_v3.0_unigene144013 SustainPine v3.0 421
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Polyprotein 7.508e-09
Internal
sp_v3.0_unigene161256 SustainPine v3.0 488
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.524e-13
C-terminus
sp_v3.0_unigene163714 SustainPine v3.0 408
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 5.0e-32
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.91e-07
Putative Complete
sp_v3.0_unigene164641 SustainPine v3.0 207
AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
Sma3: Polyprotein 8.129e-07
Internal
sp_v3.0_unigene167733 SustainPine v3.0 276
AutoFact: Unassigned protein
FL-Next: tr=Os08g0273000 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Polyprotein 8.404e-07
Putative C-terminus
sp_v3.0_unigene187503 SustainPine v3.0 434
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 3.0e-25
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Polyprotein 1.576e-17
C-terminus
sp_v3.0_unigene188256 SustainPine v3.0 402
AutoFact: polyprotein [Glycine max] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Polyprotein 2.354e-06
Internal
sp_v3.0_unigene192177 SustainPine v3.0 694
AutoFact: polyprotein [Glycine max] 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 5.375e-10
Putative Complete
sp_v3.0_unigene199558 SustainPine v3.0 257
AutoFact: Polyprotein n=1 Tax=Oryza australiensis RepID=Q0ZLH4_9ORYZ 2.0e-19
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 4.697e-06
Internal
sp_v3.0_unigene207399 SustainPine v3.0 464
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 1.4013e-45
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.889e-16
Putative C-terminus
sp_v3.0_unigene207417 SustainPine v3.0 266
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 8.062e-13
Putative C-terminus
sp_v3.0_unigene207495 SustainPine v3.0 1228
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.349e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain