Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: exon-exon junction complex

Term: GO:0035145  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24667 SustainPine v3.0 497
AutoFact: Protein mago nashi n=7 Tax=Magnoliophyta RepID=B6ST87_MAIZE 0.0
FL-Next: tr=Mago nashi; Taiwania cryptomerioides. 0.0
Sma3: Mago nashi-like protein 8.093e-21
Complete
sp_v3.0_unigene27429 SustainPine v3.0 400
AutoFact: MRNA transport factor n=1 Tax=Triticum aestivum RepID=Q2QKB2_WHEAT 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding protein 8A 1.317e-07
C-terminus
sp_v3.0_unigene152872 SustainPine v3.0 365
AutoFact: Mago nashi-like protein 2 n=1 Tax=Physalis pubescens RepID=A5H9J2_9SOLA 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mago nashi-like protein 5.215e-21
C-terminus
sp_v3.0_unigene152984 SustainPine v3.0 143
AutoFact: Mago nashi-like protein 2 n=1 Tax=Physalis pubescens RepID=A5H9J2_9SOLA 2.0e-17
FL-Next: tr=Mago nashi; Taiwania cryptomerioides. 0.0
Sma3: Mago nashi-like protein 2.869e-25
N-terminus
sp_v3.0_unigene154130 SustainPine v3.0 406
AutoFact: ACYPI000063 protein n=1 Tax=Acyrthosiphon pisum RepID=Q1ZZR0_ACYPI 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mago nashi-like protein 5.487e-21
C-terminus
sp_v3.0_unigene156967 SustainPine v3.0 339
AutoFact: Polyadenylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIF4_RICCO 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding protein 8A 1.186e-07
Internal
sp_v3.0_unigene160859 SustainPine v3.0 458
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163047 SustainPine v3.0 371
AutoFact: Protein mago nashi n=7 Tax=Magnoliophyta RepID=B6ST87_MAIZE 6.0e-40
FL-Next: tr=Mago nashi; Taiwania cryptomerioides. 0.0
Sma3: Mago nashi-like protein 5.77e-21
N-terminus
sp_v3.0_unigene164028 SustainPine v3.0 301
AutoFact: Mago nashi n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3K3I7_PUCGT 1.0e-39
FL-Next: tr=Mago nashi; Taiwania cryptomerioides. 0.0
Sma3: Mago nashi-like protein 2.869e-25
N-terminus
sp_v3.0_unigene186617 SustainPine v3.0 413
AutoFact: RNA-binding protein 8A [Danio rerio] sp|Q5D018.1|RBM8A_DANRE RecName: Full=RNA-binding protein 8A; AltName: Full=RNA-binding motif protein 8A; AltName: Full=Ribonucleoprotein RBM8A gb|AAH90261.1| Zgc:110525 [Danio rerio] 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding protein 8A 1.207e-07
C-terminus
sp_v3.0_unigene205501 SustainPine v3.0 565
AutoFact: Protein mago nashi n=7 Tax=Magnoliophyta RepID=B6ST87_MAIZE 0.0
FL-Next: tr=Mago nashi; Taiwania cryptomerioides. 0.0
Sma3: Mago nashi-like protein 8.093e-21
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain