Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Hyaluronan/mRNA-binding protein

Term: IPR006861  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17059 SustainPine v3.0 1859
AutoFact: nuclear-localized RNA binding protein [Capsicum annuum] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Salt tolerance protein 2 4.891e-09
Complete
sp_v3.0_unigene17493 SustainPine v3.0 2182
AutoFact: pfam04774, HABP4_PAI-RBP1, Hyaluronan / mRNA binding family 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear RNA binding protein, putative 6.536e-17
Complete
sp_v3.0_unigene24447 SustainPine v3.0 1895
AutoFact: Salt tolerance protein 1 n=1 Tax=Beta vulgaris RepID=Q711N4_BETVU 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear RNA binding protein, putative 6.536e-17
Complete
sp_v3.0_unigene34935 SustainPine v3.0 915
AutoFact: Salt tolerance protein 1 n=1 Tax=Beta vulgaris RepID=Q711N4_BETVU 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear RNA binding protein, putative 4.879e-17
Complete
sp_v3.0_unigene78834 SustainPine v3.0 260
AutoFact: Elicitor protein n=2 Tax=Metarhizium RepID=E9F464_METAR 9.0e-16
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene80881 SustainPine v3.0 344
AutoFact: GRP domain containing protein 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Os05g0589600 protein 7.797e-06
N-terminus
sp_v3.0_unigene85882 SustainPine v3.0 350
AutoFact: TT_ORF1 multi-domain protein 3.0e-09
coding
sp_v3.0_unigene92967 SustainPine v3.0 284
AutoFact: Salt tolerance protein 2 n=1 Tax=Beta vulgaris RepID=Q711N3_BETVU 0.0001
putative_coding
sp_v3.0_unigene126893 SustainPine v3.0 1865
AutoFact: Salt tolerance protein 1 n=1 Tax=Beta vulgaris RepID=Q711N4_BETVU 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear RNA binding protein, putative 5.599e-17
Complete
sp_v3.0_unigene143909 SustainPine v3.0 699
AutoFact: Salt tolerance protein 1 n=1 Tax=Beta vulgaris RepID=Q711N4_BETVU 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear RNA binding protein, putative 8.072e-17
C-terminus
sp_v3.0_unigene174970 SustainPine v3.0 228
AutoFact: TT_ORF1 multi-domain protein 5.0e-09
Sma3: 40S ribosomal protein S2 1.197e-07
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain