Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: KID repeat

Term: IPR003900  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene70659 SustainPine v3.0 353
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-25
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 3.172e-10
Putative C-terminus
sp_v3.0_unigene71126 SustainPine v3.0 318
• AutoFact: RVT_1 domain containing protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene71560 SustainPine v3.0 278
• AutoFact: RVT_1 domain containing protein 5.0e-09
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.4e-06
Putative C-terminus
sp_v3.0_unigene72074 SustainPine v3.0 360
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene72143 SustainPine v3.0 341
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene79048 SustainPine v3.0 445
• AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene95317 SustainPine v3.0 560
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-39
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.504e-22
Putative N-terminus
sp_v3.0_unigene102941 SustainPine v3.0 572
• AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb05g018510; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 1.005e-06
Internal
sp_v3.0_unigene107377 SustainPine v3.0 349
• AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 7.338e-07
N-terminus
sp_v3.0_unigene112118 SustainPine v3.0 340
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene112554 SustainPine v3.0 607
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.043e-10
C-terminus
sp_v3.0_unigene115558 SustainPine v3.0 166
• AutoFact: RVT_1 domain containing protein 2.0e-05
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Internal
sp_v3.0_unigene127738 SustainPine v3.0 662
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCB7_POPTR 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene132352 SustainPine v3.0 343
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene135185 SustainPine v3.0 271
• AutoFact: RVT_1 domain containing protein 3.0e-10
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene147891 SustainPine v3.0 196
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Integrase 7.781e-06
Internal
sp_v3.0_unigene159619 SustainPine v3.0 485
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene160115 SustainPine v3.0 489
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.99994e-41
• FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene161052 SustainPine v3.0 424
• AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 2.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase family protein 8.897e-07
C-terminus
sp_v3.0_unigene161556 SustainPine v3.0 311
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain