Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: KID repeat

Term: IPR003900  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56877 SustainPine v3.0 262
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene57144 SustainPine v3.0 308
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 4.0e-31
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 4.608e-11
Internal
sp_v3.0_unigene57990 SustainPine v3.0 495
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 5.0e-39
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 2.207e-08
Putative Complete
sp_v3.0_unigene58996 SustainPine v3.0 275
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 2.0e-21
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59594 SustainPine v3.0 359
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene60793 SustainPine v3.0 249
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Putative uncharacterized protein Sb05g018376; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 2.617e-07
Internal
sp_v3.0_unigene61224 SustainPine v3.0 278
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene62801 SustainPine v3.0 323
AutoFact: Unassigned protein
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene64150 SustainPine v3.0 254
AutoFact: Unassigned protein 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene65229 SustainPine v3.0 243
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 5.0e-21
FL-Next: tr=F7F22.17, putative; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene66311 SustainPine v3.0 409
AutoFact: F7F22.17 n=2 Tax=Arabidopsis thaliana RepID=Q9SHM3_ARATH 2.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene66601 SustainPine v3.0 393
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 6.0e-27
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Sma3: Integrase 8.479e-07
Internal
sp_v3.0_unigene66608 SustainPine v3.0 425
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-33
FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Sma3: Reverse transcriptase 3.148e-12
Internal
sp_v3.0_unigene66614 SustainPine v3.0 368
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Integrase 3.076e-09
Putative C-terminus
sp_v3.0_unigene67229 SustainPine v3.0 293
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-27
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 5.22e-09
Putative N-terminus
sp_v3.0_unigene67538 SustainPine v3.0 387
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene67547 SustainPine v3.0 320
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene67855 SustainPine v3.0 319
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene70104 SustainPine v3.0 366
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene70544 SustainPine v3.0 483
AutoFact: Unassigned protein 9.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain