Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: S15/NS1, RNA-binding

Term: IPR009068  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156108 SustainPine v3.0 398
• AutoFact: RecName: Full=40S ribosomal protein S13 emb|CAA80974.1| ribosomal protein S13 [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.325e-14
C-terminus
sp_v3.0_unigene156322 SustainPine v3.0 176
• AutoFact: 40S ribosomal protein S13, putative n=1 Tax=Solanum demissum RepID=Q6L4B2_SOLDE 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.696e-18
Internal
sp_v3.0_unigene156496 SustainPine v3.0 531
• AutoFact: 40S ribosomal protein S13 n=58 Tax=Deuterostomia RepID=RS13_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.85e-14
C-terminus
sp_v3.0_unigene156948 SustainPine v3.0 243
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.506e-14
Internal
sp_v3.0_unigene159867 SustainPine v3.0 500
• AutoFact: 40S ribosomal protein S13 n=6 Tax=Pucciniales RepID=E3KN70_PUCGT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.325e-14
Putative Complete
sp_v3.0_unigene160681 SustainPine v3.0 293
• AutoFact: 40S ribosomal protein S13 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W699_9STRA 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 1.592e-14
N-terminus
sp_v3.0_unigene161533 SustainPine v3.0 355
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-29
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 1.429e-35
Internal
sp_v3.0_unigene161749 SustainPine v3.0 373
• AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.999e-26
Putative Complete
sp_v3.0_unigene161820 SustainPine v3.0 253
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-22
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.698e-13
Putative C-terminus
sp_v3.0_unigene162247 SustainPine v3.0 397
• AutoFact: 40S ribosomal protein S13 n=6 Tax=Pucciniales RepID=E3KN70_PUCGT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 3.733e-18
N-terminus
sp_v3.0_unigene162249 SustainPine v3.0 224
• AutoFact: Os10g0317000 protein n=2 Tax=Oryza sativa RepID=Q7XFZ5_ORYSJ 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.021e-24
Putative Complete
sp_v3.0_unigene162252 SustainPine v3.0 296
• AutoFact: polyprotein [Glycine max] 1.0e-19
• FL-Next: tr=Disease resistance protein; pekinensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.516e-19
Internal
sp_v3.0_unigene163018 SustainPine v3.0 305
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene163412 SustainPine v3.0 200
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.0e-17
• FL-Next: tr=Putative retroelement protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene164410 SustainPine v3.0 370
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-27
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 8.42e-25
Internal
sp_v3.0_unigene164641 SustainPine v3.0 207
• AutoFact: OSIGBa0111L12.7 protein n=1 Tax=Oryza sativa RepID=Q01IZ5_ORYSA 5.0e-16
• FL-Next: tr=OSIGBa0111L12.7 protein; Oryza sativa (Rice). 0.0
• Sma3: Polyprotein 8.129e-07
Internal
sp_v3.0_unigene165584 SustainPine v3.0 349
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 5.0e-30
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
• Sma3: Pol protein integrase region 6.854e-25
Internal
sp_v3.0_unigene166312 SustainPine v3.0 333
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 5.983e-39
Internal
sp_v3.0_unigene166634 SustainPine v3.0 465
• AutoFact: 40S ribosomal protein S13 n=6 Tax=Pucciniales RepID=E3KN70_PUCGT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.325e-14
C-terminus
sp_v3.0_unigene166886 SustainPine v3.0 184
• AutoFact: 40S ribosomal protein S13, putative n=1 Tax=Ricinus communis RepID=B9R9P3_RICCO 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.116e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain