Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: signalosome assembly

Term: GO:0010387  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11276 SustainPine v3.0 1426
AutoFact: COP9 signalosome complex subunit 7 [Arabidopsis thaliana] sp|Q94JU3.1|CSN7_ARATH RecName: Full=COP9 signalosome complex subunit 7; Short=CSN complex subunit 7; AltName: Full=Protein FUSCA 5 gb|AAK50074.1|AF372934_1 At1g02090/T7I23_24 [Arabidopsis thaliana 0.0
FL-Next: sp=COP9 signalosome complex subunit 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: COP9 signalosome complex subunit 7 6.225e-18
Complete
sp_v3.0_unigene51523 SustainPine v3.0 417
AutoFact: COP9 signalosome complex subunit 7 [Arabidopsis thaliana] sp|Q94JU3.1|CSN7_ARATH RecName: Full=COP9 signalosome complex subunit 7; Short=CSN complex subunit 7; AltName: Full=Protein FUSCA 5 gb|AAK50074.1|AF372934_1 At1g02090/T7I23_24 [Arabidopsis thaliana 3.0e-24
FL-Next: Isoform 2 of COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 0.0
Sma3: COP9 signalosome complex subunit 7 1.588e-13
Putative C-terminus
sp_v3.0_unigene63843 SustainPine v3.0 307
AutoFact: Putative COP9 complex subunit 6 protein (Fragment) n=1 Tax=Brachypodium sylvaticum RepID=Q2L396_BRASY 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 6a 8.128e-14
Putative N-terminus
sp_v3.0_unigene131627 SustainPine v3.0 347
AutoFact: COP9 signalosome complex subunit 8 [Arabidopsis thaliana] sp|P43255.1|CSN8_ARATH RecName: Full=COP9 signalosome complex subunit 8; Short=CSN complex subunit 8; AltName: Full=Constitutive photomorphogenesis protein 9; AltName: Full=Protein FUSCA 7 gb|AAL58 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene141212 SustainPine v3.0 881
AutoFact: 26S proteasome non-ATPase regulatory subunit 14 n=27 Tax=Chordata RepID=PSDE_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome regulatory subunit 9.354e-10
Complete
sp_v3.0_unigene153632 SustainPine v3.0 398
AutoFact: similar to JAB; K09613 COP9 signalosome complex subunit 5 [EC:3.4.-.-] 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 5b 8.858e-09
Internal
sp_v3.0_unigene160568 SustainPine v3.0 494
AutoFact: CSN complex subunit 6A [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 6a 9.997e-14
Putative C-terminus
sp_v3.0_unigene203960 SustainPine v3.0 454
AutoFact: CSN complex subunit 6A [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 6a 1.521e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain