Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carotenoid biosynthetic process

Term: GO:0016117  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene72051 SustainPine v3.0 323
AutoFact: Phytoene desaturase n=3 Tax=Triticum aestivum RepID=B8YDB8_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phytoene desaturase 0.0
Internal
sp_v3.0_unigene80577 SustainPine v3.0 290
AutoFact: Geranyl diphosphate synthase 2 n=1 Tax=Picea abies RepID=B1A9K6_PICAB 6.0e-36
FL-Next: tr=Geranyl diphosphate synthase 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Internal
sp_v3.0_unigene81331 SustainPine v3.0 107
AutoFact: Lycopene epsilon cyclase 3B n=4 Tax=Triticeae RepID=C1IP75_WHEAT 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lycopene epsilon-cyclase 1.053e-24
Internal
sp_v3.0_unigene97634 SustainPine v3.0 518
AutoFact: Monoxygenase, putative n=1 Tax=Ricinus communis RepID=B9SVQ8_RICCO 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Monoxygenase, putative 5.683e-22
Internal
sp_v3.0_unigene102755 SustainPine v3.0 324
AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 4.06377e-44
FL-Next: tr=Putative lycopene beta cyclase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Lycopene beta-cyclase 2.75005e-41
Internal
sp_v3.0_unigene105540 SustainPine v3.0 349
AutoFact: fused [Arabidopsis thaliana] 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene121120 SustainPine v3.0 827
AutoFact: Carotenoid isomerase n=1 Tax=Ipomoea sp. Kenyan RepID=D0FZ29_9ASTE 1.4013e-45
FL-Next: sp=Prolycopene isomerase 2, chloroplastic; Oncidium hybrid cultivar (Orchid). 0.0
Sma3: CrtISO 1.354e-12
N-terminus
sp_v3.0_unigene126262 SustainPine v3.0 268
AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 3.0e-35
FL-Next: tr=Putative lycopene beta cyclase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Lycopene beta-cyclase 9.24857e-43
Internal
sp_v3.0_unigene128979 SustainPine v3.0 626
AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ3_ABIGR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
N-terminus
sp_v3.0_unigene131221 SustainPine v3.0 145
AutoFact: Unassigned protein 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene132226 SustainPine v3.0 569
AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene148981 SustainPine v3.0 225
AutoFact: Unassigned protein 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149606 SustainPine v3.0 138
AutoFact: carotenoid isomerase [Arabidopsis thaliana] sp|Q9M9Y8.2|CRTSO_ARATH RecName: Full=Carotenoid isomerase, chloroplastic; Short=CrtISO; AltName: Full=Carotenoid and chloroplast regulation protein 2; Flags: Precursor gb|AEE28042.1| carotenoid isomerase [Arabi 3.0e-12
FL-Next: sp=Prolycopene isomerase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: CrtISO 3.752e-13
Internal
sp_v3.0_unigene163859 SustainPine v3.0 166
AutoFact: Os01g0701300 protein n=2 Tax=Oryza sativa Japonica Group RepID=C7IWE3_ORYSJ 1.0e-11
FL-Next: tr=Thromboxane-A synthase-like; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative thromboxane-A synthase 3.185e-08
Internal
sp_v3.0_unigene167994 SustainPine v3.0 252
AutoFact: Lycopene epsilon cyclase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RK92_RICCO 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lycopene epsilon-cyclase 9.406e-25
Internal
sp_v3.0_unigene195053 SustainPine v3.0 84
Sma3: CrtISO 1.289e-08
unknown
sp_v3.0_unigene195418 SustainPine v3.0 380
AutoFact: lycopene epsilon-cyclase [Citrus unshiu] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene209633 SustainPine v3.0 584
AutoFact: Zeta-carotene desaturase ZDS2 n=3 Tax=Rosaceae RepID=Q5W5X6_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zeta-carotene desaturase 3.817e-40
C-terminus
sp_v3.0_unigene209693 SustainPine v3.0 829
AutoFact: Isoprenyl diphosphate synthase n=2 Tax=Picea RepID=D2IT07_PICAB 0.0
FL-Next: tr=Isoprenyl diphosphate synthase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain