Sustainpine_db
HomeAssembliesBLASTSearchInstitutions


Name: Gamma-carboxyglutamic acid-rich (GLA) domain

Term: IPR000294  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8624 SustainPine v3.0 2250
AutoFact: heteroglycan glucosidase 1 [Arabidopsis thaliana] ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gb|AAP68250. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_196, whole genome shotgun sequence 9.197e-07
C-terminus
sp_v3.0_unigene8946 SustainPine v3.0 3624
AutoFact: heteroglycan glucosidase 1 [Arabidopsis thaliana] ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gb|AAP68250. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr2 scaffold_196, whole genome shotgun sequence 8.889e-07
Complete
sp_v3.0_unigene38509 SustainPine v3.0 4356
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.102e-30
Complete
sp_v3.0_unigene45898 SustainPine v3.0 1536
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.98e-26
Putative Complete
sp_v3.0_unigene51932 SustainPine v3.0 335
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=2 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-29
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.81e-15
Putative N-terminus
sp_v3.0_unigene68075 SustainPine v3.0 301
AutoFact: RVT_1 domain containing protein 4.0e-08
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Internal
sp_v3.0_unigene70033 SustainPine v3.0 424
AutoFact: Reverse transcriptase family protein n=1 Tax=Asparagus officinalis RepID=Q2AA48_ASPOF 6.0e-36
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.873e-10
N-terminus
sp_v3.0_unigene105435 SustainPine v3.0 568
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.708e-19
Putative Complete
sp_v3.0_unigene136634 SustainPine v3.0 182
AutoFact: heteroglycan glucosidase 1 [Arabidopsis thaliana] ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gb|AAP68250. 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene156656 SustainPine v3.0 402
AutoFact: A-glucosidase, glycoside hydrolase family 31 protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11WX6_CYTH3 0.0
FL-Next: tr=Putative alpha-xylosidase; Pinus pinaster (Maritime pine). 0.0
Internal
sp_v3.0_unigene163202 SustainPine v3.0 294
AutoFact: RVT_1 domain containing protein 4.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene199189 SustainPine v3.0 579
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.243e-09
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain