Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of protein catabolic process

Term: GO:0042176  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene124782 SustainPine v3.0 265
• AutoFact: 26S proteasome subunit RPN2a [Arabidopsis thaliana] 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene127222 SustainPine v3.0 1725
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAF40455.1|AC004809_13 Strong similarity to the SEN3-like tRNA-processing protein F24L7.13 from A. thaliana gi|2914700 on BAC gb|AC003974. EST gb|AA712969 comes from this gene [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 3.069e-09
C-terminus
sp_v3.0_unigene127858 SustainPine v3.0 1432
• AutoFact: 26S proteasome regulatory particle non-ATPase subunit3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic 2.707e-18
C-terminus
sp_v3.0_unigene131502 SustainPine v3.0 618
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene133768 SustainPine v3.0 346
• AutoFact: 26S proteasome regulatory subunit S2 1B [Arabidopsis thaliana] sp|Q6XJG8.1|RPN1B_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1B; AltName: Full=26S proteasome regulatory subunit RPN1 B; Short=AtRPN1b; AltName: Full=26S proteasome reg 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.219e-08
Internal
sp_v3.0_unigene137671 SustainPine v3.0 251
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 1.84e-06
Internal
sp_v3.0_unigene138083 SustainPine v3.0 359
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome regulatory complex component protein 9.077e-09
Internal
sp_v3.0_unigene144188 SustainPine v3.0 948
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 2.127e-09
Putative C-terminus
sp_v3.0_unigene150122 SustainPine v3.0 448
• AutoFact: 26S proteasome regulatory subunit S2 n=1 Tax=Polysphondylium pallidum RepID=D3B684_POLPA 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.691e-12
Putative C-terminus
sp_v3.0_unigene152246 SustainPine v3.0 453
• AutoFact: PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like isoform 1 n=1 Tax=Acyrthosiphon pisum RepID=UPI0002061F0B 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 2.028e-09
Internal
sp_v3.0_unigene155027 SustainPine v3.0 353
• AutoFact: Putative 26S proteasome subunit RPN2a n=1 Tax=Capsicum chinense RepID=B1Q487_CAPCH 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome regulatory complex component protein 9.453e-09
Internal
sp_v3.0_unigene156646 SustainPine v3.0 309
• AutoFact: 26S proteasome regulatory subunit S2 1B [Arabidopsis thaliana] sp|Q6XJG8.1|RPN1B_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1B; AltName: Full=26S proteasome regulatory subunit RPN1 B; Short=AtRPN1b; AltName: Full=26S proteasome reg 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 7.414e-13
Internal
sp_v3.0_unigene157259 SustainPine v3.0 348
• AutoFact: putative 26S proteasome regulatory subunit S2 [Oryza sativa Japonica Group] 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.691e-12
Putative C-terminus
sp_v3.0_unigene157320 SustainPine v3.0 324
• AutoFact: PREDICTED: proteasome 26S non-ATPase subunit 2-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CB970C 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.626e-12
Internal
sp_v3.0_unigene157424 SustainPine v3.0 570
• AutoFact: 26S proteasome regulatory subunit rpn-1 [Ajellomyces capsulatus NAm1] gb|EDN06063.1| 26S proteasome regulatory subunit rpn-1 [Ajellomyces capsulatus NAm1] 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.691e-12
C-terminus
sp_v3.0_unigene166903 SustainPine v3.0 199
• AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.243e-12
Internal
sp_v3.0_unigene183155 SustainPine v3.0 544
• AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 26S proteasome regulatory subunit S2 1.968e-12
Internal
sp_v3.0_unigene201706 SustainPine v3.0 275
• AutoFact: 26S proteasome subunit RPN2b [Arabidopsis thaliana] 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome regulatory complex component protein 7.483e-09
Internal
sp_v3.0_unigene209215 SustainPine v3.0 387
• AutoFact: 26S proteasome regulatory subunit (Fragment) n=1 Tax=Gossypium hirsutum RepID=A6MUT2_GOSHI 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome regulatory subunit 1.215e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain