Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription factor binding

Term: GO:0008134  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene58083 SustainPine v3.0 162
• AutoFact: Midasin n=2 Tax=Oryza sativa Japonica Group RepID=Q109L5_ORYSJ 7.0e-15
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene60662 SustainPine v3.0 246
• AutoFact: Fimbriata (Fragment) n=1 Tax=Mimulus lewisii RepID=Q6QVW9_MIMLE 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata 5.556e-35
Internal
sp_v3.0_unigene63325 SustainPine v3.0 187
• AutoFact: PREDICTED: similar to midasin-related n=1 Tax=Vitis vinifera RepID=UPI00019863A5 7.0e-18
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene65269 SustainPine v3.0 262
• AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 3.243e-13
Internal
sp_v3.0_unigene65682 SustainPine v3.0 300
• AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 6.666e-13
Internal
sp_v3.0_unigene66806 SustainPine v3.0 393
• AutoFact: Retinoblastoma-related protein n=3 Tax=Hordeum vulgare subsp. vulgare RepID=D1M894_HORVD 0.0
• FL-Next: sp=Retinoblastoma-related protein 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retinoblastoma-related protein 1 1.756e-19
Internal
sp_v3.0_unigene68643 SustainPine v3.0 183
• AutoFact: Rab family protein 4.0e-09
• FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: GTP-binding protein, putative, expressed 1.901e-08
Internal
sp_v3.0_unigene73776 SustainPine v3.0 367
• AutoFact: Gibberellin 3-oxidase 1 n=1 Tax=Rumex palustris RepID=Q0ZBL9_9CARY 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gibberellin 3-oxidase 5.258e-22
Internal
sp_v3.0_unigene73881 SustainPine v3.0 427
• AutoFact: Protein kinase 2 beta chain n=1 Tax=Nicotiana tabacum RepID=Q70Z23_TOBAC 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase II beta chain, putative 2.845e-16
Putative C-terminus
sp_v3.0_unigene78835 SustainPine v3.0 260
• AutoFact: Casein kinase II beta chain, putative n=1 Tax=Ricinus communis RepID=B9SKF5_RICCO 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase II beta chain, putative 3.345e-16
Internal
sp_v3.0_unigene94052 SustainPine v3.0 340
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata 9.812e-35
Putative C-terminus
sp_v3.0_unigene103229 SustainPine v3.0 527
• AutoFact: Retinoblastoma-related protein n=1 Tax=Ricinus communis RepID=RBR_RICCO 0.0
• FL-Next: sp=Retinoblastoma-related protein; Ricinus communis (Castor bean). 0.0
• Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal
sp_v3.0_unigene103602 SustainPine v3.0 321
• AutoFact: Retinoblastoma-related protein n=2 Tax=Hieracium RepID=RBR_HIEPL 2.0e-31
• FL-Next: sp=Retinoblastoma-related protein; Medicago sativa (Alfalfa). 0.0
• Sma3: Retinoblastoma-related protein 8.588e-16
Internal
sp_v3.0_unigene105739 SustainPine v3.0 216
• AutoFact: MDN1, midasin homolog (ISS) [Ostreococcus tauri] emb|CAL50315.1| MDN1, midasin homolog (ISS) [Ostreococcus tauri] 1.0e-14
• FL-Next: tr=Midasin; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene107351 SustainPine v3.0 614
• AutoFact: MDN1, midasin homolog (ISS) [Ostreococcus tauri] emb|CAL50315.1| MDN1, midasin homolog (ISS) [Ostreococcus tauri] 5.0e-17
• FL-Next: sp=Midasin; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene113271 SustainPine v3.0 620
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Small GTP-binding protein 7.024e-22
N-terminus
sp_v3.0_unigene126620 SustainPine v3.0 797
• AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9SQ88_RICCO 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata 2.447e-08
N-terminus
sp_v3.0_unigene130999 SustainPine v3.0 246
• AutoFact: putative casein kinase II beta subunit [Oryza sativa Japonica Group] gb|ABB47995.2| Casein kinase II beta-4 subunit, putative, expressed [Oryza sativa Japonica Group] gb|EEC67455.1| hypothetical protein OsI_34680 [Oryza sativa Indica Group] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase II subunit beta-4 1.681e-11
C-terminus
sp_v3.0_unigene131403 SustainPine v3.0 515
• AutoFact: Gibberellin 3beta-hydroxylase n=2 Tax=Nicotiana RepID=Q9SLQ9_TOBAC 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gibberellin 3-oxidase 3.372e-18
C-terminus
sp_v3.0_unigene132381 SustainPine v3.0 334
• AutoFact: Retinoblastoma-related protein 1 n=2 Tax=Oryza sativa RepID=RBR1_ORYSJ 6.0e-37
• FL-Next: sp=Retinoblastoma-related protein 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain