Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Extracellular ligand-binding receptor

Term: IPR001828  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene99021 SustainPine v3.0 354
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-21
FL-Next: sp=Glutamate receptor 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene101234 SustainPine v3.0 783
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9GU66_POPTR 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 2.108e-19
Putative Complete
sp_v3.0_unigene101405 SustainPine v3.0 459
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7TEL9_VITVI 2.0e-33
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene101478 SustainPine v3.0 568
AutoFact: Glutamate receptor n=2 Tax=Selaginella moellendorffii RepID=D8QYE9_SELML 2.0e-26
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 6.032e-11
C-terminus
sp_v3.0_unigene104248 SustainPine v3.0 403
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9H686_POPTR 4.0e-32
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 3.31e-17
Internal
sp_v3.0_unigene105441 SustainPine v3.0 469
AutoFact: glutamate receptor [Malus hupehensis] 5.0e-30
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate receptor 3 plant, putative 1.69e-11
Internal
sp_v3.0_unigene106734 SustainPine v3.0 238
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate receptor 3 plant, putative 6.391e-17
Internal
sp_v3.0_unigene108081 SustainPine v3.0 344
AutoFact: putative ionotropic glutamate receptor ortholog GLR6 [Oryza sativa Japonica Group] dbj|BAD45881.1| putative ionotropic glutamate receptor ortholog GLR6 [Oryza sativa Japonica Group] 9.0e-32
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.436e-19
Internal
sp_v3.0_unigene108715 SustainPine v3.0 868
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 3.0e-33
FL-Next: sp=Glutamate receptor 3.1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Glutamate receptor 3 plant, putative 1.75e-17
N-terminus
sp_v3.0_unigene108732 SustainPine v3.0 322
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-31
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.386e-16
Internal
sp_v3.0_unigene109647 SustainPine v3.0 494
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5XD09_SORBI 3.0e-26
FL-Next: sp=Glutamate receptor 2.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110276 SustainPine v3.0 202
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-19
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.345e-17
Internal
sp_v3.0_unigene112848 SustainPine v3.0 250
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9GU65_POPTR 7.0e-15
FL-Next: Isoform 2 of Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 0.0
Internal
sp_v3.0_unigene129721 SustainPine v3.0 513
AutoFact: glutamate receptor, ionotropic kainate 5 precursor-like protein [Oryza sativa Japonica Group] 2.0e-17
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene129773 SustainPine v3.0 641
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 5.607e-09
Internal
sp_v3.0_unigene129858 SustainPine v3.0 489
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.708e-07
Internal
sp_v3.0_unigene130872 SustainPine v3.0 358
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7UDC6_VITVI 2.0e-09
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene132335 SustainPine v3.0 364
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 6.0e-35
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene132546 SustainPine v3.0 348
AutoFact: glutamate receptor [Malus hupehensis] 3.0e-35
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 4.436e-19
Internal
sp_v3.0_unigene147940 SustainPine v3.0 329
AutoFact: glutamate receptor, ionotropic kainate 5 precursor-like protein [Oryza sativa Japonica Group] 3.0e-21
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 2.608e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain