Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Endopeptidase Clp.

Term: EC:3.4.21.92  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4526 SustainPine v3.0 526
• AutoFact: RecName: Full=ATP-dependent Clp protease proteolytic subunit; AltName: Full=Endopeptidase Clp gb|AAA68094.1| ATP-dependent protease proteolytic subunit [Pinus contorta] 1.0e-11
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
N-terminus
sp_v3.0_unigene7387 SustainPine v3.0 1552
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=D5A7Z0_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Complete
sp_v3.0_unigene11445 SustainPine v3.0 1680
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eriobotrya japonica RepID=D0EX73_9ROSA 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Complete
sp_v3.0_unigene35289 SustainPine v3.0 476
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NSF5_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Putative C-terminus
sp_v3.0_unigene52545 SustainPine v3.0 246
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NZU9_PICSI 1.0e-34
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Putative C-terminus
sp_v3.0_unigene52831 SustainPine v3.0 357
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus trichocarpa RepID=A9PAS6_POPTR 6.0e-21
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene56416 SustainPine v3.0 425
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorella variabilis RepID=E1ZT51_9CHLO 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene59749 SustainPine v3.0 323
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NSF5_PICSI 1.0e-37
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 5.428e-28
Putative N-terminus
sp_v3.0_unigene72572 SustainPine v3.0 314
• AutoFact: ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana] sp|Q9S834.1|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5, chloroplastic; AltName: Full=Endopeptidase ClpP5; Short=nClpP5; AltName: Full=nClpP1; Flags: Precur 1.4013e-45
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene75094 SustainPine v3.0 346
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorella variabilis RepID=E1Z8L1_9CHLO 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene128392 SustainPine v3.0 642
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9P1N5_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
C-terminus
sp_v3.0_unigene133277 SustainPine v3.0 444
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=3 Tax=Physcomitrella patens subsp. patens RepID=A9RQL9_PHYPA 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene143824 SustainPine v3.0 677
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NZU9_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
C-terminus
sp_v3.0_unigene144297 SustainPine v3.0 639
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NZU9_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
N-terminus
sp_v3.0_unigene144300 SustainPine v3.0 537
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NZU9_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
N-terminus
sp_v3.0_unigene149581 SustainPine v3.0 195
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NSF5_PICSI 2.0e-28
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene166269 SustainPine v3.0 302
• AutoFact: ATP-dependent Clp protease proteolytic subunit (Fragment) n=5 Tax=Xenopus RepID=B0BMC3_XENTR 4.0e-27
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain