Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA modification

Term: GO:0000154  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4000 SustainPine v3.0 1366
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana] dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAO50630.1| putative dimethyladeno 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 9.276e-09
Complete
sp_v3.0_unigene6779 SustainPine v3.0 1193
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] gb|AAC09322.1| dimethyladenosine transferase [Arabidopsis thaliana] dbj|BAC42078.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAO50630.1| putative dimethyladeno 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 9.276e-09
Complete
sp_v3.0_unigene13158 SustainPine v3.0 588
AutoFact: dimethyladenosine transferase [Arabidopsis thaliana] gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAM44912.1| putative dimethyladenosine transf 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase, putative 1.792e-12
N-terminus
sp_v3.0_unigene51815 SustainPine v3.0 426
AutoFact: [J] COG0030 Dimethyladenosine transferase (rRNA methylation) 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 7.581e-09
C-terminus
sp_v3.0_unigene53913 SustainPine v3.0 250
AutoFact: Dimethyladenosine transferase, putative n=1 Tax=Ricinus communis RepID=B9ST15_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 3.676e-12
Internal
sp_v3.0_unigene63352 SustainPine v3.0 293
AutoFact: Identical to dimethyladenosine transferase from Arabidopsis thaliana gb|AF051326. It contains ribosomal RNA adenine dimethylases PF|00398. This gene is cut off 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 6.298e-09
Putative C-terminus
sp_v3.0_unigene63949 SustainPine v3.0 223
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana] gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68987 SustainPine v3.0 353
AutoFact: dimethyladenosine transferase [Arabidopsis thaliana] gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAM44912.1| putative dimethyladenosine transf 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase, putative 1.626e-12
N-terminus
sp_v3.0_unigene93652 SustainPine v3.0 1247
AutoFact: Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana] gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase, putative 2.195e-12
N-terminus
sp_v3.0_unigene106873 SustainPine v3.0 387
AutoFact: Putative dimethyladenosine transferse [Oryza sativa] gb|AAM47293.1|AC122146_12 Putative dimethyladenosine transferse [Oryza sativa Japonica Group] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 1.418e-12
Internal
sp_v3.0_unigene116352 SustainPine v3.0 407
AutoFact: Dimethyladenosine transferase, putative n=1 Tax=Ricinus communis RepID=B9ST15_RICCO 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene166197 SustainPine v3.0 350
AutoFact: [J] COG0030 Dimethyladenosine transferase (rRNA methylation) 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 8.127e-09
Internal
sp_v3.0_unigene184615 SustainPine v3.0 257
AutoFact: dimethyladenosine transferase [Arabidopsis thaliana] gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAM44912.1| putative dimethyladenosine transf 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase, putative 1.792e-12
Putative N-terminus
sp_v3.0_unigene193694 SustainPine v3.0 425
AutoFact: Dimethyladenosine transferase, putative n=1 Tax=Ricinus communis RepID=B9ST15_RICCO 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene197810 SustainPine v3.0 262
AutoFact: Dimethyladenosine transferase, putative n=1 Tax=Ricinus communis RepID=B9ST15_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dimethyladenosine transferase 3.752e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain