Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Group II intron splicing

Term: GO:0000373  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3750 SustainPine v3.0 1689
• AutoFact: CRS2-associated factor 2, chloroplastic precursor [Zea mays] sp|Q84N48.1|CAF2P_MAIZE RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor gb|AAP 3.0e-38
• FL-Next: sp=CRS2-associated factor 2, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 2.0e-13
C-terminus
sp_v3.0_unigene6420 SustainPine v3.0 1141
• AutoFact: CRS1_YhbY domain containing protein 1.0e-18
• FL-Next: sp=CRS2-associated factor 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 1.988e-12
C-terminus
sp_v3.0_unigene21979 SustainPine v3.0 188
• AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 9.0e-19
• FL-Next: sp=CRS2-associated factor 1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1 1.67e-13
Internal
sp_v3.0_unigene22089 SustainPine v3.0 426
• AutoFact: CRS1_YhbY domain containing protein 1.0e-06
• FL-Next: sp=CRS2-associated factor 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1 1.183e-12
Internal
sp_v3.0_unigene29152 SustainPine v3.0 980
• AutoFact: CRS2-associated factor 2 [Arabidopsis thaliana] sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor gb|AAF79596.1|AC007 0.0
• FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 8.321e-13
N-terminus
sp_v3.0_unigene42555 SustainPine v3.0 808
• AutoFact: CRS1_YhbY domain containing protein 3.0e-15
• FL-Next: sp=CRS2-associated factor 1, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 2.278e-12
Internal
sp_v3.0_unigene64716 SustainPine v3.0 239
• AutoFact: CRS2-associated factor 2 [Arabidopsis thaliana] sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor gb|AAF79596.1|AC007 8.0e-22
• FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 1.336e-12
Internal
sp_v3.0_unigene71514 SustainPine v3.0 244
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9XIL5.3|PP154_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15820 pir||G84533 hypothetical protein At2g15820 [imported] - Arabidopsis thaliana gb|AEC06439.1| pent 3.0e-23
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g15820; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene100244 SustainPine v3.0 861
• AutoFact: CRS1_YhbY domain containing protein 4.0e-12
• FL-Next: sp=CRS2-associated factor 1, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: CRS2-associated factor 2, mitochondrial 7.652e-09
N-terminus
sp_v3.0_unigene101437 SustainPine v3.0 597
• AutoFact: CRS1_YhbY domain containing protein 4.0e-14
• FL-Next: sp=CRS2-associated factor 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 2.13e-12
C-terminus
sp_v3.0_unigene105982 SustainPine v3.0 241
• AutoFact: CRS2-associated factor 1 [Arabidopsis thaliana] sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAK76556.1| unkn 4.0e-25
• FL-Next: sp=CRS2-associated factor 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 4.227e-13
Internal
sp_v3.0_unigene106519 SustainPine v3.0 242
• AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-26
• FL-Next: sp=CRS2-associated factor 1, chloroplastic; Zea mays (Maize). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 7.939e-13
Internal
sp_v3.0_unigene108714 SustainPine v3.0 312
• AutoFact: CRS2-associated factor 2, chloroplastic n=2 Tax=Arabidopsis RepID=CAF2P_ARATH 1.0e-38
• FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2 1.134e-12
Internal
sp_v3.0_unigene121949 SustainPine v3.0 294
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9XIL5.3|PP154_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15820 pir||G84533 hypothetical protein At2g15820 [imported] - Arabidopsis thaliana gb|AEC06439.1| pent 2.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g15820; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain