Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Isomerases, Intramolecular transferases (mutases), Transferring other groups.

Term: EC:5.4.99.-  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene59113 SustainPine v3.0 205
• AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 2.0e-15
• FL-Next: sp=RNA pseudourine synthase 7; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-uridine isomerase 7 1.318e-09
Internal
sp_v3.0_unigene60046 SustainPine v3.0 367
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 4.0e-33
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 5.7e-26
C-terminus
sp_v3.0_unigene62581 SustainPine v3.0 347
• AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJM4_VITVI 4.0e-22
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 2.183e-06
Putative C-terminus
sp_v3.0_unigene63564 SustainPine v3.0 133
• AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 1.0e-07
• FL-Next: Isoform 2 of RNA pseudourine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0660400 0.0
• Sma3: RNA-uridine isomerase 6 7.054e-10
Internal
sp_v3.0_unigene69028 SustainPine v3.0 186
• AutoFact: Ribosomal pseudouridine synthase, putative n=1 Tax=Ricinus communis RepID=B9RFI4_RICCO 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-uridine isomerase 1 6.546e-10
Internal
sp_v3.0_unigene72818 SustainPine v3.0 225
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 6.0e-28
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 1.349e-16
Putative N-terminus
sp_v3.0_unigene78632 SustainPine v3.0 255
• AutoFact: RNA pseudourine synthase 6 [Arabidopsis thaliana] sp|Q9SVS0.1|PUS6_ARATH RecName: Full=RNA pseudourine synthase 6, chloroplastic; AltName: Full=RNA pseudouridylate synthase 6; AltName: Full=RNA-uridine isomerase 6; Flags: Precursor emb|CAB36821.1| hypothe 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-uridine isomerase 6 9.576e-10
C-terminus
sp_v3.0_unigene79275 SustainPine v3.0 408
• AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 0.0
• FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
• Sma3: Cycloartenol synthase 0.0
Internal
sp_v3.0_unigene81764 SustainPine v3.0 312
• AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 5.60519e-45
• FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
• Sma3: Cycloartenol synthase 0.0
Internal
sp_v3.0_unigene93551 SustainPine v3.0 1099
• AutoFact: RNA pseudourine synthase 5 [Arabidopsis thaliana] sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA pseudourine synthase 5; AltName: Full=RNA pseudouridylate synthase 5; AltName: Full=RNA-uridine isomerase 5 gb|AEE78921.1| RNA pseudourine synthase 5 [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-uridine isomerase 5 1.988e-09
C-terminus
sp_v3.0_unigene95119 SustainPine v3.0 571
• AutoFact: RNA pseudourine synthase 4 [Arabidopsis thaliana] sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA pseudourine synthase 4, mitochondrial; AltName: Full=RNA pseudouridylate synthase 4; AltName: Full=RNA-uridine isomerase 4; Flags: Precursor dbj|BAB02469.1| unnamed 1.99965e-42
• FL-Next: sp=RNA pseudourine synthase 4, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-uridine isomerase 4 2.745e-09
Internal
sp_v3.0_unigene99855 SustainPine v3.0 563
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 2.436e-13
Internal
sp_v3.0_unigene100387 SustainPine v3.0 526
• AutoFact: cycloartenol synthase [Glycyrrhiza glabra] 0.0
• FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
• Sma3: Cycloartenol synthase 0.0
Internal
sp_v3.0_unigene104067 SustainPine v3.0 488
• AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-uridine isomerase 7 1.818e-09
Internal
sp_v3.0_unigene104085 SustainPine v3.0 550
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AE97_PICSI 0.0
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 1.253e-19
C-terminus
sp_v3.0_unigene111546 SustainPine v3.0 287
• AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9SM90_RICCO 2.0e-26
• FL-Next: sp=Pseudouridine synthase; Ricinus communis (Castor bean). 0.0
• Sma3: Pseudouridylate synthase 1.049e-19
Internal
sp_v3.0_unigene120927 SustainPine v3.0 352
• AutoFact: Ribosomal pseudouridine synthase, putative n=1 Tax=Ricinus communis RepID=B9SLG9_RICCO 1.0e-30
• FL-Next: sp=RNA pseudourine synthase 3, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-uridine isomerase 3 5.586e-10
Internal
sp_v3.0_unigene124437 SustainPine v3.0 220
• AutoFact: Pseudouridine synthase n=1 Tax=Ricinus communis RepID=B9SM90_RICCO 4.0e-21
• FL-Next: sp=Pseudouridine synthase; Ricinus communis (Castor bean). 0.0
• Sma3: Pseudouridylate synthase 4.205e-10
Internal
sp_v3.0_unigene137607 SustainPine v3.0 265
• AutoFact: RNA pseudourine synthase 7 [Arabidopsis thaliana] sp|Q9LU60.1|PUS7_ARATH RecName: Full=RNA pseudourine synthase 7; AltName: Full=RNA pseudouridylate synthase 7; AltName: Full=RNA-uridine isomerase 7 dbj|BAA97376.1| unnamed protein product [Arabidopsis tha 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-uridine isomerase 7 9.88e-10
Putative C-terminus
sp_v3.0_unigene138361 SustainPine v3.0 324
• AutoFact: putative tRNA pseudouridine synthase [Arabidopsis thaliana] sp|O22928.1|PUSH_ARATH RecName: Full=Putative tRNA pseudouridine synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase gb|AAC16945.1| putative pseudouridine 2.0e-11
• FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain