Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3024 SustainPine v3.0 653
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 9.465e-21
N-terminus
sp_v3.0_unigene3271 SustainPine v3.0 3137
• AutoFact: mamallian P58IPK-like protein [Arabidopsis thaliana] emb|CAB86083.1| putative protein [Arabidopsis thaliana] dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] gb|AAM62560.1| unknown [Arabidopsis thaliana] gb|AED90562.1| mamall 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 2.62e-20
Complete
sp_v3.0_unigene4304 SustainPine v3.0 701
• AutoFact: 40S ribosomal protein S27-2 n=34 Tax=Embryophyta RepID=RS272_ARATH 3.0e-31
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 1.766e-26
Complete
sp_v3.0_unigene4897 SustainPine v3.0 296
• AutoFact: 40S ribosomal protein S7-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRX6_SOLTU 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 5.196e-26
C-terminus
sp_v3.0_unigene4898 SustainPine v3.0 588
• AutoFact: Ribosomal protein L4/L1 n=3 Tax=Agaricomycetes RepID=A8N1B9_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.955e-36
Complete
sp_v3.0_unigene6894 SustainPine v3.0 1823
• AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.183e-10
Putative Complete
sp_v3.0_unigene10421 SustainPine v3.0 756
• AutoFact: Ribosomal protein S7 n=3 Tax=Cucujiformia RepID=D1M806_9CUCU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 4.647e-26
Putative Complete
sp_v3.0_unigene11829 SustainPine v3.0 437
• AutoFact: 40S ribosomal protein S13, putative [Solanum demissum] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.281e-14
C-terminus
sp_v3.0_unigene14729 SustainPine v3.0 530
• AutoFact: 40S ribosomal protein S9 n=2 Tax=Rhizoctonia solani RepID=A5X2M3_THACU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.26117e-44
Putative C-terminus
sp_v3.0_unigene15214 SustainPine v3.0 130
• AutoFact: 40S ribosomal protein S15 n=16 Tax=Poaceae RepID=RS15_ORYSJ 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 3.582e-10
Internal
sp_v3.0_unigene15258 SustainPine v3.0 514
• AutoFact: Ribosomal protein 22 of the small subunit n=4 Tax=Agaricomycotina RepID=Q9UUP9_PHARH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 30S ribosomal protein S8, putative 3.763e-08
Complete
sp_v3.0_unigene15261 SustainPine v3.0 444
• AutoFact: ribosomal protein S2 [Coprinopsis cinerea okayama7#130] gb|EAU91621.1| ribosomal protein S2 [Coprinopsis cinerea okayama7#130] 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.121e-19
C-terminus
sp_v3.0_unigene16224 SustainPine v3.0 843
• AutoFact: 40S ribosomal protein S24 n=1 Tax=Glycine max RepID=C6THP2_SOYBN 5.0e-10
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative Complete
sp_v3.0_unigene17215 SustainPine v3.0 1581
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.815e-19
Complete
sp_v3.0_unigene17350 SustainPine v3.0 983
• AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene18662 SustainPine v3.0 531
• AutoFact: RecName: Full=40S ribosomal protein S5 emb|CAA06491.1| 40S ribosomal protein S5 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.027e-24
N-terminus
sp_v3.0_unigene18822 SustainPine v3.0 1128
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 4.497e-19
Complete
sp_v3.0_unigene19121 SustainPine v3.0 1807
• AutoFact: Plant origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SP26_RICCO 0.0
• FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 40S ribosomal protein SA 3.763e-24
Complete
sp_v3.0_unigene19262 SustainPine v3.0 385
• AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 3.707e-12
Putative Complete
sp_v3.0_unigene19581 SustainPine v3.0 198
• AutoFact: 40S ribosomal protein S1 n=4 Tax=Agaricales RepID=RS3A_COPC7 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 7.492e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain