Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene191857 SustainPine v3.0 332
• AutoFact: Guanylate cyclase n=1 Tax=Callinectes sapidus RepID=Q24LS5_CALSI 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 6.618e-22
C-terminus
sp_v3.0_unigene191963 SustainPine v3.0 340
• AutoFact: putative ribosomal protein S15 [Diaphorina citri] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 5.98e-17
Putative C-terminus
sp_v3.0_unigene191986 SustainPine v3.0 477
• AutoFact: 40S ribosomal protein S2 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0W5G8_9STRA 1.0e-30
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 4.256e-15
C-terminus
sp_v3.0_unigene192102 SustainPine v3.0 477
• AutoFact: KLTH0C07810p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEB4_LACTC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.097e-28
Putative Complete
sp_v3.0_unigene192137 SustainPine v3.0 508
• AutoFact: Ribosomal protein S3 (Fragment) n=1 Tax=Latrodectus hesperus RepID=E7D1C0_9ARAC 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.019e-10
C-terminus
sp_v3.0_unigene192155 SustainPine v3.0 663
• AutoFact: 40S ribosomal protein rpS18e n=1 Tax=Tetrahymena thermophila RepID=E6PBT6_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.327e-12
Complete
sp_v3.0_unigene192182 SustainPine v3.0 301
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Artemia franciscana RepID=A7L6A4_ARTSF 5.0e-32
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 5.46e-15
N-terminus
sp_v3.0_unigene192193 SustainPine v3.0 314
• AutoFact: 40S ribosomal protein S7-like protein [Solanum tuberosum] gb|ABA46775.1| unknown [Solanum tuberosum] gb|ABB17004.1| ribosomal protein S7-like protein [Solanum tuberosum] gb|ABB87101.1| 40S ribosomal protein S7-like protein-like [Solanum tuberosum] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 4.647e-26
C-terminus
sp_v3.0_unigene192309 SustainPine v3.0 246
• AutoFact: ribosomal protein S2 [Dictyostelium discoideum AX4] sp|P27685.1|RS2_DICDI RecName: Full=40S ribosomal protein S2; AltName: Full=Protein LLRep3; AltName: Full=Ribosomal protein S4 emb|CAA39744.1| DdLLRep3 [Dictyostelium discoideum] gb|EAL60548.1| ribosomal 2.0e-16
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 1.672e-15
C-terminus
sp_v3.0_unigene192332 SustainPine v3.0 391
• AutoFact: Ribosomal protein S20 n=1 Tax=Lepidochitona cinerea RepID=E3P7H4_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene192429 SustainPine v3.0 497
• AutoFact: 40S ribosomal protein S15 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7G4_PHYIT 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 4.829e-17
Putative N-terminus
sp_v3.0_unigene192520 SustainPine v3.0 505
• AutoFact: Protein Y57G11C.16, confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=O18240_CAEEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.209e-12
Putative Complete
sp_v3.0_unigene192535 SustainPine v3.0 383
• AutoFact: 40S ribosomal protein S24 n=5 Tax=Physcomitrella patens subsp. patens RepID=A9U2W2_PHYPA 2.0e-38
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
N-terminus
sp_v3.0_unigene192577 SustainPine v3.0 440
• AutoFact: 40S ribosomal protein S5 (Fragment) n=5 Tax=Spermatophyta RepID=RS5_CICAR 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 4.317e-18
C-terminus
sp_v3.0_unigene192593 SustainPine v3.0 423
• AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 4.0e-27
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
C-terminus
sp_v3.0_unigene192714 SustainPine v3.0 347
• AutoFact: Ribosomal protein S27 n=1 Tax=Postia placenta Mad-698-R RepID=B8PCZ7_POSPM 2.0e-27
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 1.766e-26
Complete
sp_v3.0_unigene192790 SustainPine v3.0 376
• AutoFact: 40S ribosomal protein SA n=2 Tax=Vitis vinifera RepID=RSSA_VITVI 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene192887 SustainPine v3.0 414
• AutoFact: Ribosomal_S30 domain containing protein 6.0e-25
• Sma3: Ribosomal protein S30 3.362e-17
coding
sp_v3.0_unigene192952 SustainPine v3.0 353
• AutoFact: 40S ribosome protein S8 (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA6_GRIJA 1.0e-16
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 7.731e-18
C-terminus
sp_v3.0_unigene192984 SustainPine v3.0 463
• AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain