Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene188904 SustainPine v3.0 330
• AutoFact: mitochondrial ribosomal protein S25 [Trichoplax adhaerens] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 3.165e-12
C-terminus
sp_v3.0_unigene188917 SustainPine v3.0 544
• AutoFact: ribosomal protein S5a [Drosophila melanogaster] ref|XP_001977532.1| GG18202 [Drosophila erecta] ref|XP_002042347.1| GM13336 [Drosophila sechellia] ref|XP_002101460.1| GE15619 [Drosophila yakuba] sp|Q24186.1|RS5A_DROME RecName: Full=40S ribosomal protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 1.135e-21
Putative C-terminus
sp_v3.0_unigene188923 SustainPine v3.0 337
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.281e-14
C-terminus
sp_v3.0_unigene188941 SustainPine v3.0 479
• AutoFact: 40S ribosomal protein S12 n=2 Tax=Branchiostoma belcheri RepID=Q8ISP4_BRABE 0.0
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene189262 SustainPine v3.0 392
• AutoFact: 40S ribosomal protein S11 [Plasmodium vivax SaI-1] ref|XP_002258883.1| 40s ribosomal protein s11 [Plasmodium knowlesi strain H] gb|EDL44809.1| 40S ribosomal protein S11, putative [Plasmodium vivax] emb|CAQ39656.1| 40s ribosomal protein s11, putative [Plas 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.581e-28
C-terminus
sp_v3.0_unigene189509 SustainPine v3.0 514
• AutoFact: Putative ribosomal protein S4 (Fragment) n=1 Tax=Barentsia elongata RepID=A8UAC7_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Putative C-terminus
sp_v3.0_unigene189843 SustainPine v3.0 685
• AutoFact: 40S ribosomal protein S4 n=4 Tax=Obtectomera RepID=RS4_BOMMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.456e-24
C-terminus
sp_v3.0_unigene189878 SustainPine v3.0 772
• AutoFact: 40S ribosomal protein S3 [Gallus gallus] emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 1.29e-10
Complete
sp_v3.0_unigene189947 SustainPine v3.0 536
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 4.393e-17
Putative N-terminus
sp_v3.0_unigene190052 SustainPine v3.0 323
• AutoFact: 40S ribosomal protein S8 n=1 Tax=Branchiostoma floridae RepID=C3YMK6_BRAFL 3.0e-36
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
Putative N-terminus
sp_v3.0_unigene190065 SustainPine v3.0 387
• AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 2.0e-24
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
C-terminus
sp_v3.0_unigene190086 SustainPine v3.0 568
• AutoFact: Putative ribosomal protein S15 n=1 Tax=Barentsia elongata RepID=A8UAE5_9BILA 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 9.839e-17
Complete
sp_v3.0_unigene190092 SustainPine v3.0 411
• AutoFact: ribosomal protein S20 [Chlamys farreri] 0.0
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Complete
sp_v3.0_unigene190218 SustainPine v3.0 788
• AutoFact: 40S ribosomal protein SA n=1 Tax=Urechis caupo RepID=RSSA_URECA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.883e-36
Internal
sp_v3.0_unigene190330 SustainPine v3.0 356
• AutoFact: 40S ribosomal protein rpS22e n=2 Tax=Tetrahymena thermophila RepID=E6PBU0_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene190358 SustainPine v3.0 314
• AutoFact: Ribosomal protein S2 n=2 Tax=Chlamydomonadales RepID=A8HME4_CHLRE 9.99967e-42
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.121e-19
Internal
sp_v3.0_unigene190377 SustainPine v3.0 361
• AutoFact: 30S ribosomal protein S28e n=1 Tax=Trichophyton rubrum CBS 118892 RepID=F2SGB4_TRIRU 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S28e 1.708e-08
Complete
sp_v3.0_unigene190381 SustainPine v3.0 444
• AutoFact: Ribosomal protein S2 n=3 Tax=Endopterygota RepID=Q56FF2_LYSTE 0.0
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.121e-19
C-terminus
sp_v3.0_unigene190437 SustainPine v3.0 417
• AutoFact: Ribosomal protein S3a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C281_9EUKA 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.295e-17
C-terminus
sp_v3.0_unigene190534 SustainPine v3.0 182
• AutoFact: 40S ribosomal protein S3 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q7T4_9MYCE 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain