Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene62377 SustainPine v3.0 205
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3 7.117e-11
Internal
sp_v3.0_unigene62606 SustainPine v3.0 258
• AutoFact: 40S ribosomal protein S13, putative [Solanum demissum] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 2.047e-17
Internal
sp_v3.0_unigene65950 SustainPine v3.0 117
• AutoFact: 40S ribosomal protein S9 [Catharanthus roseus] 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 4.911e-20
Internal
sp_v3.0_unigene66942 SustainPine v3.0 379
• AutoFact: Putative 40S ribosomal protein S28 isoform 2 n=1 Tax=Spadella cephaloptera RepID=A8E6D0_9BILA 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S28e 9.483e-13
Complete
sp_v3.0_unigene68178 SustainPine v3.0 231
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 6.616e-31
C-terminus
sp_v3.0_unigene68181 SustainPine v3.0 208
• AutoFact: 40S ribosomal protein S24 n=2 Tax=Picea sitchensis RepID=A9NKN3_PICSI 2.0e-19
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Putative C-terminus
sp_v3.0_unigene68583 SustainPine v3.0 311
• AutoFact: Putative 40S ribosomal protein n=1 Tax=Zea mays RepID=Q8H6J0_MAIZE 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 2.507e-07
C-terminus
sp_v3.0_unigene68690 SustainPine v3.0 219
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S28e 7.041e-13
N-terminus
sp_v3.0_unigene68946 SustainPine v3.0 200
• AutoFact: 40S ribosomal protein S6 n=27 Tax=Magnoliophyta RepID=C5YNS4_SORBI 5.0e-06
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6, putative 1.141e-08
N-terminus
sp_v3.0_unigene69225 SustainPine v3.0 246
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70067 SustainPine v3.0 329
• AutoFact: putative 40S ribosomal protein S2 [Oryza sativa Japonica Group] 2.0e-29
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 3.791e-15
C-terminus
sp_v3.0_unigene70783 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 3.244e-15
N-terminus
sp_v3.0_unigene72102 SustainPine v3.0 268
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 3.65e-18
Internal
sp_v3.0_unigene73181 SustainPine v3.0 286
• AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S28e 7.041e-13
Putative Complete
sp_v3.0_unigene73469 SustainPine v3.0 379
• AutoFact: [J] COG0103 Ribosomal protein S9 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 6.53e-32
N-terminus
sp_v3.0_unigene73534 SustainPine v3.0 463
• AutoFact: Similar to 40S ribosomal protein S14 n=2 Tax=Pleosporineae RepID=E5A816_LEPMC 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 4.06e-24
C-terminus
sp_v3.0_unigene73804 SustainPine v3.0 296
• AutoFact: ribosomal protein S7 [Triticum aestivum] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 4.149e-26
C-terminus
sp_v3.0_unigene73830 SustainPine v3.0 323
• AutoFact: putative ribosomal protein [Capsicum annuum] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.209e-12
Internal
sp_v3.0_unigene74049 SustainPine v3.0 336
• AutoFact: 40S ribosomal protein S1 n=4 Tax=Agaricales RepID=RS3A_COPC7 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 7.492e-21
Internal
sp_v3.0_unigene74077 SustainPine v3.0 361
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.016e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain