Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene55875 SustainPine v3.0 311
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene56135 SustainPine v3.0 261
• AutoFact: putative 40S ribosomal protein S9 [Artemisia annua] 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.064e-34
Putative C-terminus
sp_v3.0_unigene56288 SustainPine v3.0 431
• AutoFact: Probable 40S RIBOSOMAL PROTEIN S24 n=1 Tax=Sporisorium reilianum RepID=E7A074_9BASI 3.0e-36
• FL-Next: sp=40S ribosomal protein S24-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Complete
sp_v3.0_unigene56896 SustainPine v3.0 475
• AutoFact: 40S ribosomal protein S20 n=2 Tax=Coccidioides posadasii RepID=E9D7P9_COCPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene56982 SustainPine v3.0 429
• AutoFact: cytoplasmatic ribosomal protein S13 [Triticum aestivum] 9.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 1.078e-10
C-terminus
sp_v3.0_unigene57128 SustainPine v3.0 411
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 8.0e-10
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 1.718e-10
Putative Complete
sp_v3.0_unigene57135 SustainPine v3.0 364
• AutoFact: 40S ribosomal protein S25 n=4 Tax=Pleosporineae RepID=B2WKH3_PYRTR 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 4.276e-21
Complete
sp_v3.0_unigene57246 SustainPine v3.0 197
• AutoFact: putative 40S ribosomal protein [Prunus dulcis] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene57278 SustainPine v3.0 341
• AutoFact: 40S ribosomal protein S5 n=15 Tax=leotiomyceta RepID=A6QYH3_AJECN 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 5.584e-25
N-terminus
sp_v3.0_unigene57451 SustainPine v3.0 277
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Prunus armeniaca RepID=RS4_PRUAR 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.757e-20
Internal
sp_v3.0_unigene57837 SustainPine v3.0 449
• AutoFact: 40S ribosomal protein S20-2 [Arabidopsis thaliana] ref|NP_850665.1| 40S ribosomal protein S20-2 [Arabidopsis thaliana] ref|NP_001030826.1| 40S ribosomal protein S20-2 [Arabidopsis thaliana] sp|Q9STY6.1|RS202_ARATH RecName: Full=40S ribosomal protein S20-2 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.317e-14
Putative Complete
sp_v3.0_unigene58160 SustainPine v3.0 319
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 2.61e-19
Internal
sp_v3.0_unigene58338 SustainPine v3.0 443
• AutoFact: Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95159.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S20 1.591e-18
Putative Complete
sp_v3.0_unigene59018 SustainPine v3.0 204
• AutoFact: 40S ribosomal protein n=4 Tax=Oryza sativa RepID=Q10QU9_ORYSJ 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 2.019e-28
Internal
sp_v3.0_unigene59047 SustainPine v3.0 140
• AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3, putative 1.882e-08
N-terminus
sp_v3.0_unigene59928 SustainPine v3.0 325
• AutoFact: S18.A ribosomal protein [Arabidopsis thaliana] gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana] 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 6.309e-12
Internal
sp_v3.0_unigene60691 SustainPine v3.0 280
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 2.0e-24
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S6 2.654e-11
N-terminus
sp_v3.0_unigene60713 SustainPine v3.0 162
• AutoFact: 40S ribosomal protein S16 n=1 Tax=Fritillaria agrestis RepID=RS16_FRIAG 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S16 1.585e-25
Putative N-terminus
sp_v3.0_unigene61193 SustainPine v3.0 161
• AutoFact: 40S ribosomal protein S3a n=7 Tax=Oryza sativa RepID=RS3A_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 2.884e-17
Internal
sp_v3.0_unigene62119 SustainPine v3.0 180
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 2.0e-16
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S6 1.975e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain