Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36515 SustainPine v3.0 712
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 3.0e-28
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 1.081e-14
Complete
sp_v3.0_unigene36521 SustainPine v3.0 814
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-30
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 1.081e-14
Complete
sp_v3.0_unigene36634 SustainPine v3.0 567
• AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene36690 SustainPine v3.0 847
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 5.46506e-44
Complete
sp_v3.0_unigene37677 SustainPine v3.0 506
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-21
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 4.107e-09
Complete
sp_v3.0_unigene46021 SustainPine v3.0 790
• AutoFact: 40S ribosomal protein S2 n=1 Tax=Picea abies RepID=Q9AVU0_PICAB 2.0e-36
• FL-Next: tr=40S ribosomal protein S2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 40S ribosomal protein S2 2.544e-19
C-terminus
sp_v3.0_unigene51299 SustainPine v3.0 577
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.85697e-41
Putative C-terminus
sp_v3.0_unigene51401 SustainPine v3.0 535
• AutoFact: ribosomal protein S15 [Pisum sativum] 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 1.325e-13
C-terminus
sp_v3.0_unigene51428 SustainPine v3.0 683
• AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 6.292e-17
Putative N-terminus
sp_v3.0_unigene51637 SustainPine v3.0 551
• AutoFact: 40S ribosomal protein S25 n=4 Tax=Pleosporineae RepID=B2WKH3_PYRTR 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S25 1.632e-12
Complete
sp_v3.0_unigene51949 SustainPine v3.0 423
• AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S13 1.073e-14
Putative N-terminus
sp_v3.0_unigene52071 SustainPine v3.0 372
• AutoFact: 40S ribosomal protein S15 n=4 Tax=Spermatophyta RepID=RS15_ELAOL 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 3.542e-17
N-terminus
sp_v3.0_unigene52514 SustainPine v3.0 370
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 8.377e-36
N-terminus
sp_v3.0_unigene53220 SustainPine v3.0 104
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53898 SustainPine v3.0 270
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 4.343e-07
Putative N-terminus
sp_v3.0_unigene54254 SustainPine v3.0 380
• AutoFact: 40S ribosomal protein S15a-4 [Arabidopsis thaliana] sp|Q9LX88.3|R15A4_ARATH RecName: Full=40S ribosomal protein S15a-4 emb|CAB90931.1| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] gb|AAK76511.1| putative cytoplasmic ribosomal protein S15 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene54255 SustainPine v3.0 292
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 2.654e-17
Putative Complete
sp_v3.0_unigene54386 SustainPine v3.0 281
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene54551 SustainPine v3.0 395
• AutoFact: 40S ribosomal protein S14 [Oryza sativa Indica Group] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S14 2.258e-24
Putative Complete
sp_v3.0_unigene55626 SustainPine v3.0 236
• AutoFact: 40s ribosomal protein s5-1 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_772651.1| hypothetical protein CNBK0250 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL18004.1| hypothetical protein CNBK0250 [Cryptococcus neoformans var. neoforma 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S5 5.475e-14
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain