Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene33483 SustainPine v3.0 503
• AutoFact: 40S ribosomal protein S15 n=1 Tax=Zea mays RepID=B6U476_MAIZE 0.0
• FL-Next: tr=40S ribosomal protein S15; Zea mays (Maize). 0.0
• Sma3: 40S ribosomal protein S15 6.3e-17
Complete
sp_v3.0_unigene33497 SustainPine v3.0 763
• AutoFact: 40S ribosomal protein S7-1 [Arabidopsis thaliana] ref|NP_849786.1| 40S ribosomal protein S7-1 [Arabidopsis thaliana] sp|Q9C514.1|RS71_ARATH RecName: Full=40S ribosomal protein S7-1 gb|AAG50658.1|AC084242_2 40S ribosomal protein S7 homolog, putative [Arabi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 5.341e-26
Complete
sp_v3.0_unigene33501 SustainPine v3.0 735
• AutoFact: PREDICTED: similar to ribosomal protein S7 isoform 6 [Gallus gallus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S7 5.49e-26
Complete
sp_v3.0_unigene33548 SustainPine v3.0 574
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 2.731e-24
N-terminus
sp_v3.0_unigene34260 SustainPine v3.0 731
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 1.0e-25
• FL-Next: sp=40S ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S27 2.073e-26
Complete
sp_v3.0_unigene34393 SustainPine v3.0 551
• AutoFact: ribosomal protein S26 [Pisum sativum] 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S26 2.114e-18
Complete
sp_v3.0_unigene34418 SustainPine v3.0 710
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 1.932e-19
N-terminus
sp_v3.0_unigene35435 SustainPine v3.0 680
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 3.0e-22
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 5.669e-09
Complete
sp_v3.0_unigene35451 SustainPine v3.0 500
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 1.0e-27
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 5.956e-11
Complete
sp_v3.0_unigene35575 SustainPine v3.0 364
• AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 1.0e-24
• FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S12 1.98564e-42
N-terminus
sp_v3.0_unigene35749 SustainPine v3.0 335
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative C-terminus
sp_v3.0_unigene35802 SustainPine v3.0 523
• AutoFact: 40S ribosomal protein S6 (Fragment) n=2 Tax=Ixodidae RepID=B7PLU8_IXOSC 2.0e-17
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S6 2.058e-11
C-terminus
sp_v3.0_unigene35829 SustainPine v3.0 480
• AutoFact: 40S ribosomal protein S6 n=1 Tax=Trichoplax adhaerens RepID=B3RSK1_TRIAD 0.0
• FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S6 3.184e-15
N-terminus
sp_v3.0_unigene35831 SustainPine v3.0 409
• AutoFact: Ribosomal protein S26e n=1 Tax=Sphaerius sp. APV-2005 RepID=Q4LAZ6_9COLE 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S26 2.565e-22
Complete
sp_v3.0_unigene35853 SustainPine v3.0 603
• AutoFact: 40S ribosomal protein S10 n=2 Tax=Phytophthora infestans RepID=D0MQD2_PHYIT 3.0e-34
• FL-Next: sp=40S ribosomal protein S10; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: 40S ribosomal protein S10 3.097e-19
Complete
sp_v3.0_unigene35859 SustainPine v3.0 426
• AutoFact: 40S ribosomal protein S23 n=1 Tax=Salmo salar RepID=C0H7K2_SALSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene35861 SustainPine v3.0 429
• AutoFact: Ribosomal protein S23, putative n=2 Tax=Sarcocystidae RepID=B9PHL8_TOXGO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S23 1.975e-10
Putative Complete
sp_v3.0_unigene35862 SustainPine v3.0 462
• AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 0.0
• FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene35928 SustainPine v3.0 469
• AutoFact: PREDICTED: similar to ribosomal protein S24 n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BB79 2.99878e-43
• FL-Next: sp=40S ribosomal protein S24; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S24 0.0
Complete
sp_v3.0_unigene36341 SustainPine v3.0 1056
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 8.0e-30
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 6.254e-11
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain