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Name: cytoplasmic mRNA processing body

Term: GO:0000932  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2925 SustainPine v3.0 1490
AutoFact: mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] dbj|BAC43684.1| unknown protein [Arabidopsis thaliana] gb|AAO63396.1| At5g13570 [Arabidopsis thaliana] gb|AED91912.1| mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: mRNA decapping protein 2 2.643e-09
Complete
sp_v3.0_unigene6876 SustainPine v3.0 1527
AutoFact: mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] dbj|BAC43684.1| unknown protein [Arabidopsis thaliana] gb|AAO63396.1| At5g13570 [Arabidopsis thaliana] gb|AED91912.1| mRNA-decapping enzyme subunit 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: mRNA decapping protein 2 2.643e-09
Complete
sp_v3.0_unigene13074 SustainPine v3.0 1407
AutoFact: Dcp1-like decapping family, putative [Oryza sativa Japonica Group] gb|ABA91529.1| mRNA decapping enzyme, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dcp1-like decapping family protein 3.605e-13
Complete
sp_v3.0_unigene14926 SustainPine v3.0 814
AutoFact: similar to yeast dcp1 [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dcp1-like decapping family protein 2.647e-13
Internal
sp_v3.0_unigene14997 SustainPine v3.0 754
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 4.00001e-40
FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
N-terminus
sp_v3.0_unigene23536 SustainPine v3.0 1413
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
C-terminus
sp_v3.0_unigene58143 SustainPine v3.0 151
AutoFact: DCP2 domain containing protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104787 SustainPine v3.0 425
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 5.0e-38
FL-Next: sp=Varicose-related protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene124785 SustainPine v3.0 338
AutoFact: varicose-related protein [Arabidopsis thaliana] dbj|BAB02798.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75329.1| varicose-related protein [Arabidopsis thaliana] 1.0e-21
FL-Next: sp=Varicose-related protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125022 SustainPine v3.0 329
AutoFact: VCS , related [Medicago truncatula] 2.0e-13
FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
Internal
sp_v3.0_unigene166583 SustainPine v3.0 361
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 2.0e-31
FL-Next: sp=Varicose-related protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene183375 SustainPine v3.0 604
AutoFact: Decapping protein 2-like n=3 Tax=Oryza sativa RepID=Q6K837_ORYSJ 4.0e-25
FL-Next: sp=mRNA-decapping enzyme subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene183793 SustainPine v3.0 281
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain