Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2916 SustainPine v3.0 379
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 3.0e-32
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 7.098e-36
Internal
sp_v3.0_unigene14896 SustainPine v3.0 293
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Putative N-terminus
sp_v3.0_unigene20203 SustainPine v3.0 471
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 4.545e-17
Internal
sp_v3.0_unigene25509 SustainPine v3.0 250
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Orobanche cernua var. cumana RepID=Q27U10_OROCE 2.0e-15
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene29396 SustainPine v3.0 1253
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 1.0e-27
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 2.52e-36
Putative N-terminus
sp_v3.0_unigene36243 SustainPine v3.0 764
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 6.0e-28
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 2.52e-36
Putative N-terminus
sp_v3.0_unigene38771 SustainPine v3.0 338
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Reverse transcriptase 9.659e-06
Putative N-terminus
sp_v3.0_unigene39322 SustainPine v3.0 211
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-16
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Reverse transcriptase 4.493e-09
Internal
sp_v3.0_unigene40087 SustainPine v3.0 467
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 1.434e-07
Putative N-terminus
sp_v3.0_unigene41074 SustainPine v3.0 248
AutoFact: RVT_2 domain containing protein 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 4.615e-19
Internal
sp_v3.0_unigene41120 SustainPine v3.0 235
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 1.162e-29
Internal
sp_v3.0_unigene42081 SustainPine v3.0 109
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06286_PINCU 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 4.982e-19
Internal
sp_v3.0_unigene44278 SustainPine v3.0 411
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 7.891e-20
Internal
sp_v3.0_unigene44690 SustainPine v3.0 176
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 2.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 1.4e-30
Internal
sp_v3.0_unigene45243 SustainPine v3.0 171
AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Ginkgo biloba RepID=Q9FEA4_GINBI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 5.883e-31
Internal
sp_v3.0_unigene49731 SustainPine v3.0 704
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 1.031e-12
Putative N-terminus
sp_v3.0_unigene51708 SustainPine v3.0 579
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 0.0
FL-Next: tr=Putative uncharacterized protein F9K21.130; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene51709 SustainPine v3.0 577
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 0.0
FL-Next: tr=Putative uncharacterized protein Sb08g007680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Reverse transcriptase 2.593e-08
Putative N-terminus
sp_v3.0_unigene51710 SustainPine v3.0 578
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 0.0
FL-Next: tr=Putative uncharacterized protein AT4g10830; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene51712 SustainPine v3.0 404
AutoFact: Reverse transcriptase (Fragment) n=7 Tax=Prunus mume RepID=C8C9R0_PRUMU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reverse transcriptase 1.43e-21
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain