Sustainpine_db
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Name: condensed nuclear chromosome

Term: GO:0000794  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene124789 SustainPine v3.0 412
AutoFact: cullin-like protein [Oryza sativa Japonica Group] gb|AAQ01196.1| CUL1 [Oryza sativa Japonica Group] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.054e-08
Internal
sp_v3.0_unigene126865 SustainPine v3.0 807
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 1.275e-10
Internal
sp_v3.0_unigene126905 SustainPine v3.0 733
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene127059 SustainPine v3.0 642
AutoFact: cullin 1A [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.687e-08
Internal
sp_v3.0_unigene127950 SustainPine v3.0 815
AutoFact: Cullin-4 n=2 Tax=Arabidopsis RepID=CUL4_ARATH 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin 8.434e-18
Misassembled
sp_v3.0_unigene129477 SustainPine v3.0 585
AutoFact: Putative cullin [Oryza sativa] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin protein 5.815e-12
C-terminus
sp_v3.0_unigene130296 SustainPine v3.0 410
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 9.447e-08
Internal
sp_v3.0_unigene132469 SustainPine v3.0 459
AutoFact: CUL1 n=9 Tax=Poaceae RepID=Q5ZC88_ORYSJ 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133439 SustainPine v3.0 402
AutoFact: Putative cullin [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.636e-08
Internal
sp_v3.0_unigene138240 SustainPine v3.0 263
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene140568 SustainPine v3.0 577
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.612e-08
Internal
sp_v3.0_unigene142749 SustainPine v3.0 470
AutoFact: cullin 1-like protein C [Petunia integrifolia subsp. inflata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.575e-08
Internal
sp_v3.0_unigene159400 SustainPine v3.0 474
AutoFact: PREDICTED: DNA mismatch repair protein Msh6-like n=1 Tax=Anolis carolinensis RepID=UPI000203838B 0.0
FL-Next: sp=DNA mismatch repair protein MSH7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MutS homolog 7 5.347e-08
Internal
sp_v3.0_unigene161523 SustainPine v3.0 429
AutoFact: cullin 1C [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.636e-08
Internal
sp_v3.0_unigene161951 SustainPine v3.0 373
AutoFact: putative cullin-like 1 protein [Arabidopsis thaliana] emb|CAB80750.1| putative cullin-like 1 protein [Arabidopsis thaliana] 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene203088 SustainPine v3.0 407
AutoFact: cullin 1A [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cullin-1, putative 1.687e-08
Internal
sp_v3.0_unigene203553 SustainPine v3.0 494
AutoFact: Cullin 1A n=2 Tax=Nicotiana tabacum RepID=Q711G8_TOBAC 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin protein 6.866e-12
C-terminus
sp_v3.0_unigene205518 SustainPine v3.0 395
AutoFact: Plastid CUL1 n=1 Tax=Hevea brasiliensis RepID=D8V3L8_HEVBR 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cullin 7.768e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain