Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Chromosome chr8 scaffold_88, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2351 SustainPine v3.0 5586
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_88, whole genome shotgun sequence 7.001e-10
Complete
sp_v3.0_unigene8800 SustainPine v3.0 950
AutoFact: LURP-one-related 15 protein [Arabidopsis thaliana] sp|Q9LZX1.1|LOR15_ARATH RecName: Full=Protein LURP-one-related 15 gb|AAK49593.1|AF372877_1 AT5g01750/T20L15_20 [Arabidopsis thaliana] emb|CAB82745.1| putative protein [Arabidopsis thaliana] gb|AAM98298.1| 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_88, whole genome shotgun sequence 2.107e-06
Complete
sp_v3.0_unigene78910 SustainPine v3.0 408
AutoFact: ferroportin protein family 7.0e-15
FL-Next: sp=Solute carrier family 40 member 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Chromosome chr8 scaffold_88, whole genome shotgun sequence 1.883e-06
N-terminus
sp_v3.0_unigene114483 SustainPine v3.0 461
AutoFact: mannan endo-1,4-beta-mannosidase 6 [Arabidopsis thaliana] sp|Q9LZV3.1|MAN6_ARATH RecName: Full=Mannan endo-1,4-beta-mannosidase 6; AltName: Full=Beta-mannanase 6; AltName: Full=Endo-beta-1,4-mannanase 6; Short=AtMAN6; Flags: Precursor emb|CAB82763.1| (1-4 5.0e-06
FL-Next: sp=Mannan endo-1,4-beta-mannosidase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr8 scaffold_88, whole genome shotgun sequence 2.882e-07
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain