Sustainpine_db
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Name: cis assembly of pre-catalytic spliceosome

Term: GO:0000354  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2231 SustainPine v3.0 1613
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosomal protein 6.743e-09
Complete
sp_v3.0_unigene29197 SustainPine v3.0 659
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Volvox carteri (Green alga). 0.0
Complete
sp_v3.0_unigene100770 SustainPine v3.0 127
AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosomal protein 5.308e-09
C-terminus
sp_v3.0_unigene156875 SustainPine v3.0 424
AutoFact: PREDICTED: similar to U1 small nuclear ribonucleoprotein A [Tribolium castaneum] gb|EFA00191.1| hypothetical protein TcasGA2_TC003016 [Tribolium castaneum] 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spliceosomal protein 5.028e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain