Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to red light

Term: GO:0010114  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene74619 SustainPine v3.0 206
AutoFact: Type A response regulator n=1 Tax=Selaginella moellendorffii RepID=D8SLQ9_SELML 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type-a response regulator 1.459e-34
Internal
sp_v3.0_unigene75065 SustainPine v3.0 301
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 3.0e-31
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 1.837e-35
Internal
sp_v3.0_unigene75558 SustainPine v3.0 273
AutoFact: Early light-induced protein, putative n=1 Tax=Ricinus communis RepID=B9RTJ9_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Early light inducible protein 3.048e-13
C-terminus
sp_v3.0_unigene78233 SustainPine v3.0 196
AutoFact: Actin (Fragment) n=1 Tax=Ascaris suum RepID=F1LH12_ASCSU 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 6.173e-19
Internal
sp_v3.0_unigene80929 SustainPine v3.0 339
AutoFact: Actin-1 (Fragment) n=34 Tax=Agaricomycetes RepID=D2SRE1_9AGAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.01e-17
Internal
sp_v3.0_unigene89341 SustainPine v3.0 234
Sma3: ABC transporter family protein 4.735e-06
putative_coding
sp_v3.0_unigene97805 SustainPine v3.0 462
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.4013e-45
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene99047 SustainPine v3.0 383
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 3.0e-24
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Putative N-terminus
sp_v3.0_unigene106028 SustainPine v3.0 271
AutoFact: COP1 like protein [Arabidopsis thaliana] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.033e-11
Putative N-terminus
sp_v3.0_unigene106070 SustainPine v3.0 475
AutoFact: Transcription factor SPATULA n=2 Tax=Arabidopsis RepID=SPT_ARATH 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helix-loop-helix DNA-binding domain containing protein, expressed 5.908e-06
N-terminus
sp_v3.0_unigene106556 SustainPine v3.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 7.641e-14
Putative N-terminus
sp_v3.0_unigene107574 SustainPine v3.0 680
AutoFact: Actin n=5 Tax=Agaricomycetes RepID=ACT_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.335e-30
C-terminus
sp_v3.0_unigene111024 SustainPine v3.0 264
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 2.0e-27
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 5.975e-40
Internal
sp_v3.0_unigene112940 SustainPine v3.0 608
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene116270 SustainPine v3.0 112
AutoFact: Actin-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5N9D7_ORYSJ 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 6.088e-20
Putative N-terminus
sp_v3.0_unigene120678 SustainPine v3.0 269
AutoFact: Ubiquitin ligase protein cop1, putative n=1 Tax=Ricinus communis RepID=B9T5N2_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 4.548e-11
Internal
sp_v3.0_unigene122377 SustainPine v3.0 191
AutoFact: putative cytochrome P450 [Oryza sativa Japonica Group] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABA 8-oxidase 1.054e-14
Internal
sp_v3.0_unigene123969 SustainPine v3.0 131
AutoFact: ABA 8'-hydroxylase CYP707A1 n=1 Tax=Solanum tuberosum RepID=Q3HNF4_SOLTU 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABA 8-oxidase 5.769e-15
Internal
sp_v3.0_unigene124681 SustainPine v3.0 263
AutoFact: response regulator protein [Dianthus caryophyllus] 2.0e-12
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Sma3: Type-a response regulator 4.484e-28
Putative C-terminus
sp_v3.0_unigene126781 SustainPine v3.0 357
AutoFact: Abscisic acid 8'-hydroxylase 3 n=2 Tax=Oryza sativa RepID=ABAH3_ORYSJ 3.0e-19
FL-Next: tr=Cytochrome P450 90A20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Abscisic acid 8'-hydroxylase 1.181e-14
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain