Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mitotic chromosome condensation

Term: GO:0007076  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150444 SustainPine v3.0 423
• AutoFact: Histone H2B n=7 Tax=Trypanosoma RepID=H2B_TRYCR 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.473e-32
C-terminus
sp_v3.0_unigene150938 SustainPine v3.0 473
• AutoFact: Histone H2B n=1 Tax=Moneuplotes crassus RepID=H2B_EUPCR 7.0e-39
• FL-Next: sp=Histone H2B; Olisthodiscus luteus (Marine phytoflagellate) (Heterosigma akashiwo). 0.0
• Sma3: Histone H2B 1.232e-34
Complete
sp_v3.0_unigene152652 SustainPine v3.0 459
• AutoFact: Histone H2B n=2 Tax=Phytophthora infestans T30-4 RepID=D0MY21_PHYIT 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.525e-34
Putative Complete
sp_v3.0_unigene156733 SustainPine v3.0 352
• AutoFact: Histone H2B n=1 Tax=Moneuplotes crassus RepID=H2B_EUPCR 2.0e-26
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.47242e-42
Internal
sp_v3.0_unigene157226 SustainPine v3.0 331
• AutoFact: Histone H2B n=1 Tax=Branchiostoma floridae RepID=C3YWC7_BRAFL 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 9.652e-30
Putative C-terminus
sp_v3.0_unigene157423 SustainPine v3.0 339
• AutoFact: Histone H2B.1 n=3 Tax=Tetrahymena RepID=H2B1_TETTH 8.0e-32
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.877e-36
Putative C-terminus
sp_v3.0_unigene157647 SustainPine v3.0 471
• AutoFact: Histone H2B n=1 Tax=Culex quinquefasciatus RepID=B0X774_CULQU 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 2.184e-34
Complete
sp_v3.0_unigene158648 SustainPine v3.0 522
• AutoFact: Histone H2b (Fragment) n=2 Tax=Batrachochytrium dendrobatidis JAM81 RepID=F4NV72_BATDE 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.94e-34
Putative Complete
sp_v3.0_unigene158848 SustainPine v3.0 409
• AutoFact: Histone H2B n=5 Tax=Neoptera RepID=E0V935_PEDHC 5.0e-34
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 5.615e-36
C-terminus
sp_v3.0_unigene159556 SustainPine v3.0 435
• AutoFact: structural maintenance of chromosomes protein 2-2 [Arabidopsis thaliana] sp|Q9SN90.1|SMC22_ARATH RecName: Full=Structural maintenance of chromosomes protein 2-2; Short=AtSMC2-2; AltName: Full=Chromosome-associated protein E-2; Short=AtCAP-E2 emb|CAB61972. 1.0e-24
• FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Condensin complex components subunit 4.493e-08
Internal
sp_v3.0_unigene161646 SustainPine v3.0 311
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 1.4013e-45
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.694e-09
Internal
sp_v3.0_unigene165487 SustainPine v3.0 221
• AutoFact: Histone H2B n=9 Tax=Agaricales RepID=H2B_AGABI 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 5.04804e-41
Internal
sp_v3.0_unigene165759 SustainPine v3.0 468
• AutoFact: Histone H2B n=9 Tax=Agaricales RepID=H2B_AGABI 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.39e-36
N-terminus
sp_v3.0_unigene166151 SustainPine v3.0 495
• AutoFact: Histone H2B n=9 Tax=Agaricales RepID=H2B_AGABI 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 3.378e-34
Putative Complete
sp_v3.0_unigene192464 SustainPine v3.0 411
• AutoFact: Histone H2B n=1 Tax=Moneuplotes crassus RepID=H2B_EUPCR 7.0e-39
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 5.226e-37
C-terminus
sp_v3.0_unigene200345 SustainPine v3.0 505
• AutoFact: Histone H2B n=2 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UPD5_9EUKA 2.0e-33
• FL-Next: sp=Histone H2B; Olisthodiscus luteus (Marine phytoflagellate) (Heterosigma akashiwo). 0.0
• Sma3: Histone H2B 1.211e-38
Complete
sp_v3.0_unigene204524 SustainPine v3.0 513
• AutoFact: Histone H2B n=1 Tax=Culex quinquefasciatus RepID=B0X774_CULQU 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.165e-34
Putative Complete
sp_v3.0_unigene204787 SustainPine v3.0 427
• AutoFact: Histone H2B.1 n=3 Tax=Tetrahymena RepID=H2B1_TETTH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.362e-34
Complete
sp_v3.0_unigene204963 SustainPine v3.0 487
• AutoFact: Histone H2B.1 n=3 Tax=Tetrahymena RepID=H2B1_TETTH 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.362e-34
Complete
sp_v3.0_unigene205007 SustainPine v3.0 490
• AutoFact: Histone H2B n=8 Tax=Paramecium RepID=A0BEG1_PARTE 6.0e-40
• FL-Next: sp=Histone H2B; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
• Sma3: Histone H2B 5.155e-34
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain