Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ion transport

Term: GO:0006811  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene108732 SustainPine v3.0 322
AutoFact: Glutamate receptor (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H5K3_POPTR 2.0e-31
FL-Next: sp=Glutamate receptor 3.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.386e-16
Internal
sp_v3.0_unigene109647 SustainPine v3.0 494
AutoFact: Glutamate receptor n=1 Tax=Sorghum bicolor RepID=C5XD09_SORBI 3.0e-26
FL-Next: sp=Glutamate receptor 2.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene110276 SustainPine v3.0 202
AutoFact: Glutamate receptor (Fragment) n=2 Tax=Vitis vinifera RepID=D7SWB7_VITVI 1.0e-19
FL-Next: sp=Glutamate receptor 3.6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 1.345e-17
Internal
sp_v3.0_unigene112848 SustainPine v3.0 250
AutoFact: Glutamate receptor n=1 Tax=Populus trichocarpa RepID=B9GU65_POPTR 7.0e-15
FL-Next: Isoform 2 of Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 0.0
Internal
sp_v3.0_unigene114448 SustainPine v3.0 186
AutoFact: RecName: Full=Two pore calcium channel protein 1; AltName: Full=Voltage-dependent calcium channel protein TPC1; Short=HvTPC1 gb|AAR27998.1| two-pore calcium channel [Hordeum vulgare] 4.0e-13
FL-Next: sp=Two pore calcium channel protein 1; Hordeum vulgare (Barley). 0.0
Sma3: Voltage-dependent calcium channel protein TPC1 4.755e-08
Internal
sp_v3.0_unigene119997 SustainPine v3.0 374
AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inward rectifying potassium channel 5.971e-11
Internal
sp_v3.0_unigene120775 SustainPine v3.0 236
AutoFact: RecName: Full=Potassium channel KOR2; AltName: Full=K(+) outward-rectifying channel 2 emb|CAD40970.2| OSJNBa0027P08.8 [Oryza sativa Japonica Group] 1.0e-22
FL-Next: Isoform 2 of Potassium channel KOR2 OS=Oryza sativa subsp. japonica GN=Os04g0445000 0.0
Internal
sp_v3.0_unigene121782 SustainPine v3.0 191
AutoFact: Potassium channel TORK1 n=1 Tax=Nicotiana tabacum RepID=Q5NT78_TOBAC 7.0e-21
FL-Next: sp=Potassium channel KOR1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene124235 SustainPine v3.0 308
AutoFact: Outwardly rectifying potassium channel n=1 Tax=Samanea saman RepID=Q9FS92_SAMSA 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene124987 SustainPine v3.0 392
AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 4.0e-33
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 2.536e-09
Internal
sp_v3.0_unigene125862 SustainPine v3.0 148
AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 8.0e-15
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 3.825e-06
Internal
sp_v3.0_unigene126914 SustainPine v3.0 595
AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 2.0e-22
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 4.62e-06
C-terminus
sp_v3.0_unigene126916 SustainPine v3.0 421
AutoFact: guanine nucleotide exchange factor, putative [Plasmodium falciparum 3D7] gb|AAN37020.1| guanine nucleotide exchange factor, putative [Plasmodium falciparum 3D7] 5.0e-06
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.646e-14
coding
sp_v3.0_unigene127427 SustainPine v3.0 369
AutoFact: Fork_head_N multi-domain protein 2.0e-08
coding
sp_v3.0_unigene128419 SustainPine v3.0 469
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] emb|CAB40130.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] dbj|BAB08864.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] gb|AED96975. 1.0e-39
FL-Next: Isoform 2 of Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 3.193e-20
Internal
sp_v3.0_unigene129721 SustainPine v3.0 513
AutoFact: glutamate receptor, ionotropic kainate 5 precursor-like protein [Oryza sativa Japonica Group] 2.0e-17
FL-Next: sp=Glutamate receptor 3.2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene129773 SustainPine v3.0 641
AutoFact: Glutamate receptor n=1 Tax=Vitis vinifera RepID=A5AH90_VITVI 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 5.607e-09
Internal
sp_v3.0_unigene129858 SustainPine v3.0 489
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.708e-07
Internal
sp_v3.0_unigene129867 SustainPine v3.0 381
AutoFact: Shaker-like potassium channel 1 n=1 Tax=Populus euphratica RepID=D2KPG5_POPEU 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel AKT1 7.782e-08
N-terminus
sp_v3.0_unigene130623 SustainPine v3.0 695
AutoFact: cyclic nucleotide-gated channel C [Phaseolus vulgaris] 3.0e-32
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 1.511e-17
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain