Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast organization

Term: GO:0009658  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35289 SustainPine v3.0 476
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis RepID=A9NSF5_PICSI 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Putative C-terminus
sp_v3.0_unigene37014 SustainPine v3.0 285
• AutoFact: Chloroplast inner envelope protein, 110 kD (IEP110) n=2 Tax=Pisum sativum RepID=O24293_PEA 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative chloroplast inner envelope protein 2.434e-08
Internal
sp_v3.0_unigene44582 SustainPine v3.0 826
• AutoFact: Ribonuclease II, putative n=1 Tax=Ricinus communis RepID=B9T6X7_RICCO 0.0
• FL-Next: tr=Ribonuclease II, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Ribonuclease II-like protein 1.111e-09
N-terminus
sp_v3.0_unigene47949 SustainPine v3.0 672
• AutoFact: ClpB [Phaseolus lunatus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 101 4.449e-17
Internal
sp_v3.0_unigene50522 SustainPine v3.0 312
• AutoFact: Type-B response regulator n=1 Tax=Catharanthus roseus RepID=Q71BZ1_CATRO 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 2.323e-30
Internal
sp_v3.0_unigene52931 SustainPine v3.0 296
• AutoFact: Heat shock protein 101 n=5 Tax=Vitis RepID=Q3L1D0_VITVI 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 101 3.902e-16
Internal
sp_v3.0_unigene55282 SustainPine v3.0 251
• AutoFact: 101 kDa heat shock protein n=3 Tax=Solanaceae RepID=Q9ZT13_TOBAC 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 101 2.907e-16
Internal
sp_v3.0_unigene55523 SustainPine v3.0 358
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 101 5.287e-16
N-terminus
sp_v3.0_unigene56416 SustainPine v3.0 425
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorella variabilis RepID=E1ZT51_9CHLO 0.0
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene58800 SustainPine v3.0 240
• AutoFact: ribonuclease G [Francisella tularensis subsp. holarctica LVS] ref|YP_764259.1| ribonuclease G [Francisella tularensis subsp. holarctica OSU18] ref|ZP_02276037.1| ribonuclease G [Francisella tularensis subsp. holarctica FSC200] ref|YP_001429513.2| ribonucl 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative ribonuclease E 2.032e-09
Internal
sp_v3.0_unigene61942 SustainPine v3.0 322
• AutoFact: putative endoribonuclease E [Oryza sativa Japonica Group] 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative ribonuclease E 2.076e-09
Internal
sp_v3.0_unigene62280 SustainPine v3.0 301
• AutoFact: type-B response regulator [Catharanthus roseus] 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 1.043e-34
Internal
sp_v3.0_unigene63538 SustainPine v3.0 347
• AutoFact: Type B response regulator n=2 Tax=Selaginella moellendorffii RepID=D8R9R2_SELML 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 8.438e-18
Internal
sp_v3.0_unigene63988 SustainPine v3.0 182
• AutoFact: [O] COG0542 ATPases with chaperone activity, ATP-binding subunit 4.0e-07
• FL-Next: sp=Chaperone protein ClpB2, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chaperone, Hsp100 family, clpb-type 3.104e-08
Internal
sp_v3.0_unigene64324 SustainPine v3.0 232
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Golden2-like transcription factor 1.318e-12
Internal
sp_v3.0_unigene65629 SustainPine v3.0 202
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic; Flags: Precursor gb|AAA34160.1| ATP-dependent protease (CD4A) [Solanum lycopersicum] 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease ATP-binding subunit clpA CD4B,chloroplast, putative, expressed 1.141e-11
Internal
sp_v3.0_unigene66774 SustainPine v3.0 303
• AutoFact: type-B response regulator [Catharanthus roseus] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-b response regulator 2.728e-35
Internal
sp_v3.0_unigene66937 SustainPine v3.0 385
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T6B9_RICCO 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene67859 SustainPine v3.0 252
• AutoFact: Glutamyl-tRNA synthetase 1, 2, putative n=1 Tax=Ricinus communis RepID=B9T2L7_RICCO 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutamyl-tRNA synthetase 2.554e-11
Internal
sp_v3.0_unigene71083 SustainPine v3.0 328
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=CLPAA_SOLLC 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain