Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: thiamine metabolic process

Term: GO:0006772  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene78597 SustainPine v3.0 282
AutoFact: ATPase [Cryptococcus neoformans var. neoformans JEC21] ref|XP_775817.1| hypothetical protein CNBD2270 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21170.1| hypothetical protein CNBD2270 [Cryptococcus neoformans var. neoformans B-3501A] gb|AAW43 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 9.203e-08
Internal
sp_v3.0_unigene102304 SustainPine v3.0 585
AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 1.183e-12
C-terminus
sp_v3.0_unigene105555 SustainPine v3.0 373
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 9.682e-13
C-terminus
sp_v3.0_unigene106598 SustainPine v3.0 496
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene116465 SustainPine v3.0 791
AutoFact: ATPase [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42236.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene120217 SustainPine v3.0 286
AutoFact: thiamin pyrophosphokinase 2 [Arabidopsis thaliana] gb|AAK68838.1| putative thiamin pyrophosphokinase [Arabidopsis thaliana] gb|AAM10055.1| putative thiamin pyrophosphokinase [Arabidopsis thaliana] gb|AAC27477.2| putative thiamin pyrophosphokinase [Arabido 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene148137 SustainPine v3.0 490
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 3.00004e-41
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: RNA-directed DNA polymerase (Reverse transcriptase) 9.831e-10
Putative N-terminus
sp_v3.0_unigene154600 SustainPine v3.0 278
AutoFact: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated [Tribolium castaneum] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.227e-13
Internal
sp_v3.0_unigene157917 SustainPine v3.0 281
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA-type ATPase family protein, putative, expressed 6.735e-08
Internal
sp_v3.0_unigene158722 SustainPine v3.0 416
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] gb|AEE84971.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-severing protein katanin 60kDa subunit 4.813e-07
Internal
sp_v3.0_unigene163305 SustainPine v3.0 326
AutoFact: RVT_1 domain containing protein 1.0e-14
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene164322 SustainPine v3.0 165
AutoFact: putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] dbj|BAD53067.1| putative thiamin pyrophosphokinase [Oryza sativa Japonica Group] 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thiamin pyrophosphokinase 1 1.592e-08
Internal
sp_v3.0_unigene165093 SustainPine v3.0 270
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAF02878.1|AC009525_12 Unknown protein [Arabidopsis thaliana] gb|AAM62805.1| thiamin pyrophosphokinase, putative [Arabidopsis thaliana] gb|AEE27489.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 9.826e-13
Internal
sp_v3.0_unigene165602 SustainPine v3.0 176
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 3.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene166042 SustainPine v3.0 351
AutoFact: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Gallus gallus] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.145e-13
N-terminus
sp_v3.0_unigene166955 SustainPine v3.0 497
AutoFact: pfam01423, LSM, LSM domain 3.0e-13
FL-Next: tr=Glycine rich protein-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.145e-13
Complete
sp_v3.0_unigene183803 SustainPine v3.0 227
AutoFact: thiamin pyrophosphokinase 2 [Arabidopsis thaliana] gb|AAK68838.1| putative thiamin pyrophosphokinase [Arabidopsis thaliana] gb|AAM10055.1| putative thiamin pyrophosphokinase [Arabidopsis thaliana] gb|AAC27477.2| putative thiamin pyrophosphokinase [Arabido 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
N-terminus
sp_v3.0_unigene192121 SustainPine v3.0 458
AutoFact: PREDICTED: similar to GL19160 isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI00006A5B0C 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable U6 snRNA-associated Sm-like protein LSm4 4.31e-13
Putative Complete
sp_v3.0_unigene201549 SustainPine v3.0 256
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative thiamin pyrophosphokinase 7.939e-13
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain