Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: signal recognition particle

Term: GO:0048500  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene152441 SustainPine v3.0 360
AutoFact: mitochondrial ribosomal protein S25 [Trichoplax adhaerens] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.958e-21
Complete
sp_v3.0_unigene153775 SustainPine v3.0 291
AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.671e-21
N-terminus
sp_v3.0_unigene157549 SustainPine v3.0 231
AutoFact: Signal recognition particle 54 kDa protein, putative n=2 Tax=Plasmodium (Plasmodium) RepID=A5K3Q7_PLAVS 9.0e-16
FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: SRP54 9.148e-12
Internal
sp_v3.0_unigene157958 SustainPine v3.0 213
AutoFact: Srp101p GTpase, signal recognition particle receptor alpha subunit n=2 Tax=Cryptosporidium RepID=Q5CV65_CRYPV 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159183 SustainPine v3.0 243
AutoFact: [U] COG0552 Signal recognition particle GTPase 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene190473 SustainPine v3.0 453
AutoFact: Signal recognition particle receptor alpha subunit (Sr-alpha) n=1 Tax=Aedes aegypti RepID=Q178J5_AEDAE 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene193704 SustainPine v3.0 397
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 8.0e-22
FL-Next: sp=Cell division protein FtsY homolog, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene203167 SustainPine v3.0 629
AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 6.216e-12
Putative Complete
sp_v3.0_unigene204767 SustainPine v3.0 380
AutoFact: Putative ribosomal protein S24 (Fragment) n=1 Tax=Latrodectus hesperus RepID=E7D1X5_9ARAC 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 7.503e-12
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain