Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SRP-dependent cotranslational protein targeting to membrane

Term: GO:0006614  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1801 SustainPine v3.0 2404
AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene3383 SustainPine v3.0 2624
AutoFact: signal recognition particle subunit SRP72 [Arabidopsis thaliana] gb|AAG28892.1|AC008113_8 F12A21.17 [Arabidopsis thaliana] gb|AAO41909.1| unknown protein [Arabidopsis thaliana] gb|AAO50689.1| unknown protein [Arabidopsis thaliana] gb|AEE34681.1| signal re 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene9492 SustainPine v3.0 242
AutoFact: putative chloroplast SRP receptor cpFtsY precursor [Oryza sativa Japonica Group] dbj|BAG86738.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC72197.1| hypothetical protein OsI_05275 [Oryza sativa Indica Group] gb|EEE56037.1| hypothetical pr 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene24126 SustainPine v3.0 464
AutoFact: Ribosomal protein S25 n=1 Tax=Lepidochitona cinerea RepID=E3P7H5_9MOLL 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.226e-16
Complete
sp_v3.0_unigene24249 SustainPine v3.0 685
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene30931 SustainPine v3.0 370
AutoFact: PREDICTED: similar to putative ribosomal protein S25 n=1 Tax=Ciona intestinalis RepID=UPI000180B8F1 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.575e-16
Complete
sp_v3.0_unigene31139 SustainPine v3.0 445
AutoFact: Ribosomal protein S25 n=3 Tax=Ixodidae RepID=Q4PM82_IXOSC 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 1.897e-20
Complete
sp_v3.0_unigene32567 SustainPine v3.0 500
AutoFact: Putative ribosomal protein S25 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q70MT3_CRAGI 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 3.587e-16
Complete
sp_v3.0_unigene33261 SustainPine v3.0 523
AutoFact: signal recognition particle subunit SRP19 [Arabidopsis thaliana] sp|Q943Z6.1|SRP19_ARATH RecName: Full=Signal recognition particle 19 kDa protein; Short=SRP19 gb|AAL27515.1|AF439847_1 At1g48160/F21D18_11 [Arabidopsis thaliana] gb|AAM65885.1| signal recogn 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Signal recognition particle 19 kDa protein 2.499e-14
N-terminus
sp_v3.0_unigene56245 SustainPine v3.0 322
AutoFact: Signal recognition particle receptor alpha subunit, putative n=1 Tax=Ricinus communis RepID=B9STS5_RICCO 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene58435 SustainPine v3.0 395
AutoFact: signal recognition particle subunit SRP72 [Arabidopsis thaliana] gb|AAG28892.1|AC008113_8 F12A21.17 [Arabidopsis thaliana] gb|AAO41909.1| unknown protein [Arabidopsis thaliana] gb|AAO50689.1| unknown protein [Arabidopsis thaliana] gb|AEE34681.1| signal re 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene59932 SustainPine v3.0 391
AutoFact: pfam00665, rve, Integrase core domain 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene64775 SustainPine v3.0 215
AutoFact: Cell division protein ftsy, putative n=1 Tax=Ricinus communis RepID=B9RDL9_RICCO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene77840 SustainPine v3.0 349
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.994e-09
Putative C-terminus
sp_v3.0_unigene102041 SustainPine v3.0 584
AutoFact: chloroplast srp54 receptor1 [Zea mays] emb|CAD70570.1| chloroplast SRP receptor cpFtsY precursor [Zea mays] gb|ACR34281.1| unknown [Zea mays] 3.0e-34
FL-Next: sp=Cell division protein FtsY homolog, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene140557 SustainPine v3.0 510
AutoFact: putative signal recognition particle receptor [Oryza sativa Japonica Group] dbj|BAD10269.1| putative signal recognition particle receptor [Oryza sativa Japonica Group] 8.0e-13
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
C-terminus
sp_v3.0_unigene150508 SustainPine v3.0 393
AutoFact: 40S ribosomal protein S25 n=1 Tax=Branchiostoma belcheri RepID=RS25_BRABE 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.456e-16
Complete
sp_v3.0_unigene150559 SustainPine v3.0 346
AutoFact: signal recognition particle receptor alpha subunit, [Plasmodium chabaudi chabaudi] emb|CAH76902.1| signal recognition particle receptor alpha subunit, putative [Plasmodium chabaudi chabaudi] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene151435 SustainPine v3.0 239
AutoFact: 40S ribosomal protein S25 (Fragment) n=2 Tax=core eudicotyledons RepID=Q6VEV1_SOYBN 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 5.899e-16
C-terminus
sp_v3.0_unigene151694 SustainPine v3.0 420
AutoFact: Ribosomal protein S25, putative n=2 Tax=Aedes aegypti RepID=Q16SG6_AEDAE 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S25 4.696e-16
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain